LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele08g2574	ATGTTGATTTTTTTTGCCAATCACTATGTTCTCCAGAATTTGTTTACGGGAACGACGATTGGCAATGTTAAGGAGTTTGATGGGCTGTATTACCTGGAAGAGAATGAAAATAAAACTGTTGCGTCTTGTCATAATGTGTTTCTCCCTAGTACTAGTAATTTGGACTTATGGCACAAATGGTTAGGTCATCCAAACTTTCAATACATGTCTGAGATGTTTCCTTCACTTATTTATAATAAAAATACTAAATTTTATTGTGATTCTTATGAATTGGCCAAACACTATTGTGCTTCTTTTTCCAGTCTTCCATATCACGCTTCTGCACCTTTTACGACTATTCATAGTGACTTATGGGGATCCTTTCGTACCCCAAACAGTACCAAGTCTAAATGGTTTATCACCTTTGTTGACGAACGCACTCATGTTACTTGGAACCTTGATACGGACATAGCATCTGCTAATGCTGCTCTTCCACTCAACAATGTTTATGGGGAGAGTAGCAGCTATCCTGAACCTGAACATTTCCAGGAAACCACTGAAGAACAGAAGTCCTTGGTAAGCACTGGTGGAACTTGTGAGCCTCCAGAGGATCGGTTCCTGAATATACCTGAGCAGTTTGCAGTGGATGGTAAAACTTTGAAGGATGAATATAAAGCGGAAGCAAGGCATGATGAAAGTCCTGTTAATGTTGATGATGTGTTTGATGGTCTATACTTGGATGCTATTGATTTTCCTCAGATTGGTGATGGTTCATTCCTGGAAACCAATGATCTTTTGAATCCCATTGAGGCAGATCTTGATGTCAAGGACATGCTGGATGAGTATCTTAACTACTTGGATGCTGATGATGATATCACCAAGTTTATATCTTTTGAGTCTCCTCAGATTAGGAGCAATGTAGAATCAATTCCTGACCAAGGGCCGCCTTTCATTCAGAATGTGGACGAGGAACCCAACATTACATGTAAGCAGAATTTTGATGAAGCACCTTGTAGTAATGGAGCTTCCTCTTCTAAGAAGAATCCAGAATTGTCAAAATCAGTAACAGGAGATACGAATCCATGGACAAAAAGGGCCAGTCGCTTGTTGGACAGCATCCCTGCTTCTCCTGCCTTTGCTTCAGAGCTTCCTCCCAAAGACATTGCTCTTCGGCTTCATTCTGCTGCTCAATCTTCCCAGCACGTAACTGCAGGGATGATTAGAGTAACTAACGTTACTCTTAGAGGTACCGGGATGGACTGGACGCAGGGCAAGAATGGAGGGTTCAACTTCGTGATCTCTTCTGATTTTTCTCAACCTAATAATATTTCTGATGCGTTGGTCCCAGTTTCTGGCAAGAGTGCCTTTTTGGTGTCACATTGCTGGTTTTTCTTGATGCTCTTTTCGGTTCTTATTCTTTCAATGAGTTGCAAGATTGGGAGTTGCATGTATGCTGCTGGTAAATGA	1446	0.4115	MLIFFANHYVLQNLFTGTTIGNVKEFDGLYYLEENENKTVASCHNVFLPSTSNLDLWHKWLGHPNFQYMSEMFPSLIYNKNTKFYCDSYELAKHYCASFSSLPYHASAPFTTIHSDLWGSFRTPNSTKSKWFITFVDERTHVTWNLDTDIASANAALPLNNVYGESSSYPEPEHFQETTEEQKSLVSTGGTCEPPEDRFLNIPEQFAVDGKTLKDEYKAEARHDESPVNVDDVFDGLYLDAIDFPQIGDGSFLETNDLLNPIEADLDVKDMLDEYLNYLDADDDITKFISFESPQIRSNVESIPDQGPPFIQNVDEEPNITCKQNFDEAPCSNGASSSKKNPELSKSVTGDTNPWTKRASRLLDSIPASPAFASELPPKDIALRLHSAAQSSQHVTAGMIRVTNVTLRGTGMDWTQGKNGGFNFVISSDFSQPNNISDALVPVSGKSAFLVSHCWFFLMLFSVLILSMSCKIGSCMYAAGK	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele08g2574	481	PANTHER	TRANSPOSASE, PUTATIVE-RELATED	11	145	-	-
	Lele08g2574	481	MobiDBLite	consensus disorder prediction	165	194	-	-
	Lele08g2574	481	Pfam	GAG-pre-integrase domain	28	94	IPR025724	-
	Lele08g2574	481	MobiDBLite	consensus disorder prediction	324	355	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele08g2574	Lele-ChrLele08	31498813	31505340	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele08g2574	152	478	NAC Transcription Factor Family	AT5G04410	27.485	3.19e-24	103