Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2574 ATGTTGATTTTTTTTGCCAATCACTATGTTCTCCAGAATTTGTTTACGGGAACGACGATTGGCAATGTTAAGGAGTTTGATGGGCTGTATTACCTGGAAGAGAATGAAAATAAAACTGTTGCGTCTTGTCATAATGTGTTTCTCCCTAGTACTAGTAATTTGGACTTATGGCACAAATGGTTAGGTCATCCAAACTTTCAATACATGTCTGAGATGTTTCCTTCACTTATTTATAATAAAAATACTAAATTTTATTGTGATTCTTATGAATTGGCCAAACACTATTGTGCTTCTTTTTCCAGTCTTCCATATCACGCTTCTGCACCTTTTACGACTATTCATAGTGACTTATGGGGATCCTTTCGTACCCCAAACAGTACCAAGTCTAAATGGTTTATCACCTTTGTTGACGAACGCACTCATGTTACTTGGAACCTTGATACGGACATAGCATCTGCTAATGCTGCTCTTCCACTCAACAATGTTTATGGGGAGAGTAGCAGCTATCCTGAACCTGAACATTTCCAGGAAACCACTGAAGAACAGAAGTCCTTGGTAAGCACTGGTGGAACTTGTGAGCCTCCAGAGGATCGGTTCCTGAATATACCTGAGCAGTTTGCAGTGGATGGTAAAACTTTGAAGGATGAATATAAAGCGGAAGCAAGGCATGATGAAAGTCCTGTTAATGTTGATGATGTGTTTGATGGTCTATACTTGGATGCTATTGATTTTCCTCAGATTGGTGATGGTTCATTCCTGGAAACCAATGATCTTTTGAATCCCATTGAGGCAGATCTTGATGTCAAGGACATGCTGGATGAGTATCTTAACTACTTGGATGCTGATGATGATATCACCAAGTTTATATCTTTTGAGTCTCCTCAGATTAGGAGCAATGTAGAATCAATTCCTGACCAAGGGCCGCCTTTCATTCAGAATGTGGACGAGGAACCCAACATTACATGTAAGCAGAATTTTGATGAAGCACCTTGTAGTAATGGAGCTTCCTCTTCTAAGAAGAATCCAGAATTGTCAAAATCAGTAACAGGAGATACGAATCCATGGACAAAAAGGGCCAGTCGCTTGTTGGACAGCATCCCTGCTTCTCCTGCCTTTGCTTCAGAGCTTCCTCCCAAAGACATTGCTCTTCGGCTTCATTCTGCTGCTCAATCTTCCCAGCACGTAACTGCAGGGATGATTAGAGTAACTAACGTTACTCTTAGAGGTACCGGGATGGACTGGACGCAGGGCAAGAATGGAGGGTTCAACTTCGTGATCTCTTCTGATTTTTCTCAACCTAATAATATTTCTGATGCGTTGGTCCCAGTTTCTGGCAAGAGTGCCTTTTTGGTGTCACATTGCTGGTTTTTCTTGATGCTCTTTTCGGTTCTTATTCTTTCAATGAGTTGCAAGATTGGGAGTTGCATGTATGCTGCTGGTAAATGA 1446 0.4115 MLIFFANHYVLQNLFTGTTIGNVKEFDGLYYLEENENKTVASCHNVFLPSTSNLDLWHKWLGHPNFQYMSEMFPSLIYNKNTKFYCDSYELAKHYCASFSSLPYHASAPFTTIHSDLWGSFRTPNSTKSKWFITFVDERTHVTWNLDTDIASANAALPLNNVYGESSSYPEPEHFQETTEEQKSLVSTGGTCEPPEDRFLNIPEQFAVDGKTLKDEYKAEARHDESPVNVDDVFDGLYLDAIDFPQIGDGSFLETNDLLNPIEADLDVKDMLDEYLNYLDADDDITKFISFESPQIRSNVESIPDQGPPFIQNVDEEPNITCKQNFDEAPCSNGASSSKKNPELSKSVTGDTNPWTKRASRLLDSIPASPAFASELPPKDIALRLHSAAQSSQHVTAGMIRVTNVTLRGTGMDWTQGKNGGFNFVISSDFSQPNNISDALVPVSGKSAFLVSHCWFFLMLFSVLILSMSCKIGSCMYAAGK 481
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2574 481 PANTHER TRANSPOSASE, PUTATIVE-RELATED 11 145 - -
Lele08g2574 481 MobiDBLite consensus disorder prediction 165 194 - -
Lele08g2574 481 Pfam GAG-pre-integrase domain 28 94 IPR025724 -
Lele08g2574 481 MobiDBLite consensus disorder prediction 324 355 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele08g2574 Lele-ChrLele08 31498813 31505340 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2574 152 478 NAC Transcription Factor Family AT5G04410 27.485 3.19e-24 103