Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2573 ATGGGTCGTGATTCTGTGACTTCTCTTGCCCCCGGATTCCGATTCCACCCTACCGACGAAGAAATCATTCGCTACTACCTCAGGCGCAAGGTGTGCGGCAAATCCTTCCAGTTCAATCCAATTGCCGTCGTTGACATCTATAAATCTGAGCCGTGGGACCTACCCTGTCAGTCGAAGCTGAAAAGTAGGGACTTGGAATGGTACTTCTTCAGTGGGCTGGACAGGAAGTACGGGAATGGGTCGAAGACAAATCGGGCTACGGAGAAAGGGTACTGGAAGACTACGGGGAAGGATCGCCCAGTGCGACACAACTCGCGAATTGTTGGAATGAAGAAGACCCTGGTTTATCATAGTGGTCGAGCGCCGCACGGTGTTCGTACCAATTGGGTCATGCATGAGTACAGAATGGCCGATGAAGAATTGGTGAAAGCAGTAATAGCTCAGGATGCTTTTGTGCTGTGTAGGGTTTTCCAGAAGAGCGGTACTGGGCCAAAGAATGGAGAGAAGTACGGTGCCCCCTTCATAGAGGAGGAATGGGAAGAGGATGAGGTGGCTCCAGTGTCAGGTGAAGGGGCTGTTACTGATGAAGTTTTAATGGTTGATGATGTTGAAGCTTATGTTGAAACAAACGACCTTGAGCAGAGCAGTGAAGCTTGCTGTTGTCTTCGCTCGGTCGGTCACTTATGTCCCTCCGTTACTGTCTACATGGAGGCCAGTCGATCGGTTGACGGGGAAAACTCATCGATACGTCACACTGCCGGCGAGAACACCGTCTTGATTGTTCTCGACAAACTCACAGGTGACAACTACACCGAGTGGGCCCAATCAATGTGCCTAGCTCTCGATGACTGTGACAAACTTGGTCACATCAATGACAATATCATCATCCTGCCTACGTCCGACGCCAAGGTATAG 915 0.5049 MGRDSVTSLAPGFRFHPTDEEIIRYYLRRKVCGKSFQFNPIAVVDIYKSEPWDLPCQSKLKSRDLEWYFFSGLDRKYGNGSKTNRATEKGYWKTTGKDRPVRHNSRIVGMKKTLVYHSGRAPHGVRTNWVMHEYRMADEELVKAVIAQDAFVLCRVFQKSGTGPKNGEKYGAPFIEEEWEEDEVAPVSGEGAVTDEVLMVDDVEAYVETNDLEQSSEACCCLRSVGHLCPSVTVYMEASRSVDGENSSIRHTAGENTVLIVLDKLTGDNYTEWAQSMCLALDDCDKLGHINDNIIILPTSDAKV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2573 304 FunFam Nac domain-containing protein 86 18 162 - -
Lele08g2573 304 Pfam gag-polypeptide of LTR copia-type 261 291 IPR029472 -
Lele08g2573 304 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Lele08g2573 304 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 189 - -
Lele08g2573 304 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Lele08g2573 304 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Lele08g2573 304 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2573 Lele-ChrLele08 31495683 31497752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2573 1 199 NAC Transcription Factor Family AT5G04410 73.869 3.50e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g2573 NAM 1.6e-36 No_clan