Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2572 ATGGGTTTTGTTGAGCCAGTGACTGCCATTTCTGTCGCATTTTACGGTACCCCTCTTTTGTTGCTTGACCCTCAATCAAAGACCCATCTTTTCCGTTTTGCTTCGGCAACTCCACCACCAAAAGCCCTAATCTCCATACCCATCTTCTTCTGCTTCTTGTTCAATCTTAACCCCCTTATGGGTCGCGAGACGTTGCCAGTTCCAGCTCCACCAGCCCCTGCAGTGACAACACCGAATCCAACATCACCATTAGTAGCACCACAAGCTCCTCCTACATCACTGGCTCCTGGGTTCCGGTTTCACCCAACTGATGAGGAGCTCGTTATTTACTACCTTAAGCGCAAAGTTTGTGGGAAAACTTTCCGATTTGATGCAATCTCTGAGGTCGACATTTACAGAAGCGAGCCTTGGCACCTAGCAGATAAGTCGAGGTTAAAGACAAGGGACCAAGAATGGTATTTTTTTAGTGCATTGGATAAGAAATACGGTAATGGAGGGAGAATGAACAGGGCCACGAGCAAAGGATACTGGAAAGCCACTGGGAATGACCGTCCAGTGAGGCATGAACAAAGGACCGTGGGGCTGAAGAAAACTTTGGTATTTCATAGTGGAAGGGCTCCAGATGGTAAGCGTACCAATTGGGTTATGCATGAGTACAGGCTTGTTGATGAAGAGCTTGAAAGAGCTGGAATTGGTTCCACCCAGGATGCATACGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGTCAACGTTATGCACCTTTCATTGAGGAAGAATGGGATGATTCATCAGCAATGATTCCAGGGGCAGAGCCTGTAGAAGAAGCTACAGCCATCCATCGCCCACTCATTGAAGGCAATGGTCATGTTGGTTGTTTTGAAGGAACTAATGCAGTCCAGGATACTCATTCCATCAATAAGGCTCCTCTTGATGTGAATAAGCTACCAATTGAAACTCAAAATCTTTTAGCTGTCTGCAAGAGGGAGAGCATGGCTGAGTATCCATCGCCCGAAAGGGATAATTCTAAGTCTATGGATGAGTACCCGTCGCCACAAACAGACAATCCGAAGCCATTCTCGCTAATATACAAAAGAAGGCGGCATAATTTGAACTCTAATCATTCAAATGTTCCTGAGCATTCGGCCCGTAACAGCCAAGATCCATGCTCTTCGTTAATAACAACCGCGGCAACAACTCTCCCAACTACGACCACCACTACAACTGCCAGCGCTTCGTCGAGAAAACACTTTTTGTCTGCATTGGTGGAGTTTTCCCTACTTGAATCTCTTGAACCTAAGGAAAGTCCTTCGCTTTGTGCGCCAGAATTCAACTCCTCTACTCTCGACTCACCCTTGCCCCCGAGCTGCATGAAGTTCATCCGGCAGTTGCAGGACGAGGTCCGCAAACTCTCGGTGGAAAGGGAGACGATGAAGTTTGAGGTGATGAGCGCGCAGGCCATGATTAACATCCTGCAATCGCGTATCGACATGCTGACCAAAGAGAACAAGGATTTGAAGAGGGGCACTGAGAATGCTTAG 1554 0.4698 MGFVEPVTAISVAFYGTPLLLLDPQSKTHLFRFASATPPPKALISIPIFFCFLFNLNPLMGRETLPVPAPPAPAVTTPNPTSPLVAPQAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKTFRFDAISEVDIYRSEPWHLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERAGIGSTQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDSSAMIPGAEPVEEATAIHRPLIEGNGHVGCFEGTNAVQDTHSINKAPLDVNKLPIETQNLLAVCKRESMAEYPSPERDNSKSMDEYPSPQTDNPKPFSLIYKRRRHNLNSNHSNVPEHSARNSQDPCSSLITTAATTLPTTTTTTTASASSRKHFLSALVEFSLLESLEPKESPSLCAPEFNSSTLDSPLPPSCMKFIRQLQDEVRKLSVERETMKFEVMSAQAMINILQSRIDMLTKENKDLKRGTENA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2572 517 FunFam Nac domain-containing protein 86 103 249 - -
Lele08g2572 517 Gene3D NAC domain 103 249 IPR036093 GO:0003677|GO:0006355
Lele08g2572 517 Coils Coil 465 513 - -
Lele08g2572 517 Pfam No apical meristem (NAM) protein 96 221 IPR003441 GO:0003677|GO:0006355
Lele08g2572 517 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 93 377 - -
Lele08g2572 517 ProSiteProfiles NAC domain profile. 94 246 IPR003441 GO:0003677|GO:0006355
Lele08g2572 517 MobiDBLite consensus disorder prediction 333 364 - -
Lele08g2572 517 SUPERFAMILY NAC domain 88 247 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2572 Lele-ChrLele08 31483993 31490805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2572 60 512 NAC Transcription Factor Family AT3G10480 43.015 7.10e-115 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g2572 NAM 2.3e-35 No_clan