Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2560 ATGAAGGGTCTCGCAGTCCAGGTGGTAGCCAGCCGGTGGTTTGTGGTGTTTGCGTCGTTTCTGGTCATGGCGGCAGCCGGAGCCACCTACATGTTCGGCTTGTACTCGCCGGACATAAAATCCACCCTGGGCTACGACCAAACCACCCTCAACCTCCTCAGTTTCTTCAAGGACGTCGGCGCCAACGTCGGCATCCTCTCTGGGCTGATCAACGAGTTGACTCCGCCGTGGGTAGTGCTGGTCATCGGCGCCGTCCTCAACTTCTTCGGCTACTTCATGATATGGCTTAGCGTTACCCAAAAAATTCCCAAACCCAAAGTCTGGCAAATGTTCCTCTATATCTGTATAGGTGCAAATTCTCAGACGTTTGCAAACACAGGGTCTCTGGTAACATGTGTGAAGAACTTTCCAGAAAGCCGAGGAGTAGTTCTGGGAATTCTCAAAGGCTACGTTGGTCTGAGTGGAGCAATTATAACTCAACTATATCATGCCTTCTACTTCAACGATACAAAAGCTTTAATCCTCCTTATCGGCTGGCTTCCGGCCGCCATATCCTTCGCCTTCCTCCGCACCATCCGTTACATCACCCCCGCCCGCCACCCCAATGAACTCAAGGTCTTCTACAACTTCCTCTACATCTCCCTCGGCCTCGCCGGATTCCTCATGCTCATCATCATCGTCCAGAAACAGACCCACTTTAACCAGTCCGAGTACGGCCTCAGCGCCGCCGTCGTCTTCTTCCTCCTCTTCCTCCCCCTCGCCATCGTCTATATCGAAGAATTCAAAGTCTGGCAAGCCAAACGCCTCGCCCTTCAAGACCCCGTCAAGAACATCATCGTCGCCAACCCTCCGACGACCGCTCCCGGCGGTGATATAACAAAAGCAAGACGAGAAGGTGAACCAGAGATTAAGTGGTGGCAGAATGTTTTCAGCCCACCGGAGAGAGGTGAGGATTACACAATTCTTCAAGCTCTTTTCAGTATGGACATGATTATACTGTTCATGGCTAGCATCTGTGGAATCGGAGGTACGTTGACGGCGATTGACAATCTGGGTCAAATCGGAGCATCCTTAGGTTACAGGAACAACAGCATAAGCACCTTCGTTTCACTGGTGAGTATTTGGAACTACCTAGGACGTGTCTTCGCAGGTTTCGTCTCTGAATATTATCTAAACAAATACAAATTTCCTCGTACTCTCATGCTCACTCTGACTCTCGTACTTTCATGCGCGGGACATCTTCTGATAGCGTTCAACGTTAAAGAAGGCCTCTATGTAGCTTCTGTGATTATAGGGTTTTGTTTTGGAGCACAATGGCCATTGATTTTTGCTATTATTTCTGAGTTATTTGGGCTGAAATATTATTCAACTCTGTATAATTTTGGGGGATCTGCTAGCCCAGTCGGGTTATATATTCTTAACGTGAGAATCACTGGTCATTTGTATGATCAAGAAGCTAAGAAGCAATTGGCAGCTTTAGGGTTACAGAGAGAAGAAGGAAAAGAGTTGAAATGTGTTGGATCTGATTGCTTTAAGATGTCGTTTATAATTATCACGGCTGCCACTTTCTTTGGTGCTCTTATATCTCTCATTTTAGTCTCCAGAACAAGGAAATTTTATAAAGGTGACATCTATAAGAGGTTCCAGGAGACCAACGCGGCTGCCGAGAATGTTGGTGCCGGAAGTAGCACCGCCGGGACGGGAGAGGGCGGCCGGGAGAAGGAATTAGAGGTGATCAAGGGATAG 1746 0.4828 MKGLAVQVVASRWFVVFASFLVMAAAGATYMFGLYSPDIKSTLGYDQTTLNLLSFFKDVGANVGILSGLINELTPPWVVLVIGAVLNFFGYFMIWLSVTQKIPKPKVWQMFLYICIGANSQTFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYHAFYFNDTKALILLIGWLPAAISFAFLRTIRYITPARHPNELKVFYNFLYISLGLAGFLMLIIIVQKQTHFNQSEYGLSAAVVFFLLFLPLAIVYIEEFKVWQAKRLALQDPVKNIIVANPPTTAPGGDITKARREGEPEIKWWQNVFSPPERGEDYTILQALFSMDMIILFMASICGIGGTLTAIDNLGQIGASLGYRNNSISTFVSLVSIWNYLGRVFAGFVSEYYLNKYKFPRTLMLTLTLVLSCAGHLLIAFNVKEGLYVASVIIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGGSASPVGLYILNVRITGHLYDQEAKKQLAALGLQREEGKELKCVGSDCFKMSFIIITAATFFGALISLILVSRTRKFYKGDIYKRFQETNAAAENVGAGSSTAGTGEGGREKELEVIKG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2560 581 SUPERFAMILY MFS general substrate transporter 12 251 IPR036259 -
Lele08g2560 581 FunFam Nodulin family protein 321 542 - -
Lele08g2560 581 SUPERFAMILY MFS general substrate transporter 177 539 IPR036259 -
Lele08g2560 581 CDD MFS_Mch1p_like 11 526 - -
Lele08g2560 581 Gene3D MFS general substrate transporter like domains 307 541 IPR036259 -
Lele08g2560 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 543 - -
Lele08g2560 581 Pfam Nodulin-like 12 256 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2560 Lele-ChrLele08 31363102 31365578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2560 1 550 Nodulin-like Gene Family AT2G39210 69.424 0.0 799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2634 05 42236312 42238822 Lele08g2560 08 31363102 31365578 hybridization
Lele06g2621 06 34093481 34096028 Lele08g2560 08 31363102 31365578 hybridization