Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2541 ATGATGAATAACTCTGTCTCAGATAACAGTTTTTACATCGAAAGTGATGACGAAGATGTGGAAAAACTTCTTAATAAAGGAGAAGCTGATGCTGATGATGGGAACGACTCAGATTCTTCAAATTTTTCAAATGAAAACCAGCAGCCGAACAAACCCAGTTCGTACAACGTCTCATGGCCTCAGAGTTACAGGCAGTCAATTGATCTATACAGTAGTGTACCATCACCAAATATCGGATTTCTGGGCACTCCCTCACTGTCCAGATTAAGTAGCTCCTTTCTTTCTACGTCTCTAACAAGAAGGCACACTCCTGAATCGCTACCTTCCGCAAAGCCTCTGTTACAACCTACAGCAGATGAGCCACAGAGACGAAGCTCTCATACTTTGCTTCCTCCTATTCCTTCTAGGAGGTCGTCTTTGCTTAAGCAGGATGCTGCCAAGGTTTCTCATGAAGTCCCAATTCCTCGCCAGTGCTCTTACGGACAAGCTGTGCTTAATGGTATAAATGTCCTTTGTGGTGTAGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGCGGATGGCTTGGGCTTTCTATTTTATTAATTTTTGCAGTTCTTTCCTTTTATACTGGGCTCCTTTTGCGTGCCTGCTTGGATAGTGAACCTGGCCTAGAAACGTACCCTGATGTTGGCCAAGCTGCATTTGGAACTACAGGACGTATTTTCATCTCAATAGTATTGTACGCGGAACTATATGCTTGTTGCATAGAGTATATAATTCTGGAGAGCGATAACTTGTCTTCATTATTTCCAAATGCAAGCTTAAGTTTGGGTGTCATTGAATTGAATTCACATGTTCTATTTGCACTGTTGACCACCTTGGCTGTTCTTCCTACTTGTTGGCTCCGTGACCTAAGTATTCTCAGTTACATCTCAGCTGGAGGAGTTATTGCATCAGTTTTGGTGTCTCTCTGCTTGTTGTGGATTGGGCTGGAAGATGGAGTTGGCTTTGAGCACAAAGGGACACCATTGAATCTTGCGACTCTCCCTGTTGCTTTGGGTGTCTATGGTTACTGCTATTCAGGACATGCAGTGTTCCCAAATATCTATACATCAATGGCAAATCCAAATCAATTCCCTGCAGTGCTATTAGCATGCTTCGGTATTTGTACCTTATTGTATGCTGGGGTGGCTGTTATGGGGTACACCATGTTTGGTGAAGCTACACTTTCTCAGTTCACTCTTAACTTGCCTCCAGATTTAGTGGCCACCAAGGTTGCTGTGTGGACAACGGTGGTCAACCCATTCACCAAATATCCTTTGATCACCACATATGCATTGACTATATCCCCAGTAGCAATGAGTCTGGAGGAGTTGATACCGTCAACCAACTCTAAGTCTTATCTATATTCCATCTTCATCAGAACTGGACTGGTAGTTTCTACGCTCCTTGTTGGTCTTTCAGTTCCCTTCTTTGGTCTGGTGATGTCGTTGATTGGATCTTTACTCACAATGCTTGTTACCTTGATTCTTCCCTGTGCTTGTTTCCTGAGAATCTTGCGTGGCAGAGTCTCAAACCTTCAGGCATCACTTTGCATTGGAGTGATCACAGTAGGGGTTGCTTCATCTGCCTATGGAACGTACTCAGCCCTTACAAAGATTATAGAAAGCTTAAGTCAATGA 1665 0.4348 MMNNSVSDNSFYIESDDEDVEKLLNKGEADADDGNDSDSSNFSNENQQPNKPSSYNVSWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPESLPSAKPLLQPTADEPQRRSSHTLLPPIPSRRSSLLKQDAAKVSHEVPIPRQCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILLIFAVLSFYTGLLLRACLDSEPGLETYPDVGQAAFGTTGRIFISIVLYAELYACCIEYIILESDNLSSLFPNASLSLGVIELNSHVLFALLTTLAVLPTCWLRDLSILSYISAGGVIASVLVSLCLLWIGLEDGVGFEHKGTPLNLATLPVALGVYGYCYSGHAVFPNIYTSMANPNQFPAVLLACFGICTLLYAGVAVMGYTMFGEATLSQFTLNLPPDLVATKVAVWTTVVNPFTKYPLITTYALTISPVAMSLEELIPSTNSKSYLYSIFIRTGLVVSTLLVGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGRVSNLQASLCIGVITVGVASSAYGTYSALTKIIESLSQ 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2541 554 MobiDBLite consensus disorder prediction 119 133 - -
Lele08g2541 554 PANTHER OS05G0424000 PROTEIN-RELATED 167 529 - -
Lele08g2541 554 MobiDBLite consensus disorder prediction 100 135 - -
Lele08g2541 554 FunFam Amino acid transporter AVT1A 156 551 - -
Lele08g2541 554 Pfam Transmembrane amino acid transporter protein 158 544 IPR013057 -
Lele08g2541 554 MobiDBLite consensus disorder prediction 1 58 - -
Lele08g2541 554 MobiDBLite consensus disorder prediction 36 58 - -
Lele08g2541 554 MobiDBLite consensus disorder prediction 16 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2541 Lele-ChrLele08 31123146 31131544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2541 2 487 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.617 0.0 704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2618 05 42015405 42027313 Lele08g2541 08 31123146 31131544 hybridization
Lele06g2601 06 33854465 33863260 Lele08g2541 08 31123146 31131544 hybridization