Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2538 ATGAGGAAACTTCACCATCACATCTCTGACGACCTCGAGGCCTTCATCTCCCGGCGAAGCAACCCCCTCAAGTTCCCCTTTTTTTGCCGAACTCAACTCAGGGACTTCGATTCAGATCAGCTGCTGCAAGCTTCGATTCGAGCATTTGCTGATTCTTCTCCTTCTTCTAGGTTTGGCTGCAAAATACTATGGTCATGGTTAGCCATTGTGGTTTTGAGCTCCTTGAGTTTGGTCCGGTGCCAAGTTAACAGTGGCTCCAATCCATTCGGTGATGCTTCTGGCGCTCTTCCTTTTATGACACAGCTTGTGAATGTCCAGCTCTCCAATCTTACTAGAGATCTCAGCCAGGAAATCAAAAGCCAGTCCAGCTTCTGCGTCAAAGACCCGGAAGCTGAGTGGAACAAGGCATTTAACTTTTCATCTGATTTGAGCTTCTTGACTTCTTGCATTCAGAAAACTCCAGGAGATATTACACGACGTTTCTGCACAGTAGCAGAAGTGAAGTCTTATTTTAGAAGTATAACTGAAAAGATTGGAAGTACCAGTTACTTGAAGCCTAACAGGAATTGCAATTTAACTTCATGGGGCTCTGGGTGTGAGCCTGGATGGGCGTGTAGTGCTGACTCAGATGAGCAGGTTGACCTTAGAACATCACAGGATATCCCAGCAAGAACTACAAACTGCCAGGCATGTTGTGAGGGTTTCTTCTGCCCGCAGGGTCTTACCTGCATGATACCTTGTCCATTGGGTTCCTATTGCCCCCTAGCAACACTGAATCGAACAACTGGTTTATGTGAACCATATCAGTATCGGCTACCAGCAAACCAGCCAAACCATACATGTGGAGGAGCACATATTTGGGCTGATGTTGATAACAGTGAAGAAGTATTTTGTCCAGCGGGATACTATTGTCCATCAACCACCAAAAAAATCACTTGCAGTAATGGACGTTACTGCAGGATGGGGTCCACATCTGAAAAACGCTGCTACAATTTGGTATCATGTAAATCAGGCGCTGAAAGTCAGAACCTTCATGTATATGGAATTATGTTCATAGTTGGTTTGAGTACTTTGTTACTCATTATTTACAGCTGCTCTGACCAAGTCCTCTCAATTAGGGAAAGACGGCAAGCCAAATCAAGAGATGCAGCTGCTAGAAGTGTAAAGAGCTCAGCACAAGCACGTAGAAGGTGGAAAAATGCTAAAGATGCTGTTACGAGGCATGCTAGCAGGCTTCAATCTCATTTGTCTTTCTCATTTTCTCACCAAAAGAATGGAGCTCACTCAGAAGAACTTCAGATTTTAAATCAAGTGATCCCTGAGGCAGATGACGATTTGTTATCACCCTTACCTTCTAACACTTCAAGAGCAACTTTGGATTCCAGAAATCAGATAGAAACTGGGCACGGAATTGAAAATGATGAGTTTGATATGGAAGATGGACATAGGTTTGTTACTGCAAATAATTCCAAGGGTAAAAAACTACATACACGTAGCAAGATATTCAGGCATGCATATTCTCAACTTGAGAAAGAGAAGGCTCAGCAACAAGAATACAAGAATCTTACCTTCTCAGGAGTGATTAGCATGGCTTCCAACAGTGACCGAAGGAAGAGGCCTCTGATTGAGATTTCTTTCAAAGATCTGAGTCTTATGTTAAAATCACAAAACAAGTATATACTGCGATGTGTTACTGGAAACATAAAACCAGGTCATATTACTGCTGTCATGGGTCCTTCAGGGGCTGGTAAAACAACGTTTCTTTCAGCACTTGCAGGAAAAGCACTTGGATGCAAGAAGAGTGGTTTAATATTAATAAATGGAAAGAATGAATCGATCCACTCCTATAAAAAAGTTATTGGTTTTGTGCCCCAAGATGATATCGTTCATGGAAACTTGACAGTGGAAGAAAATCTCTGGTTCAATGCAAATTGCAGGCTCTCTGCTGAATCTTCGAAAGCGGATAAAGTAGTGGTTGTTGAAAGAGTTATTGAATTCTTGGGACTTCACTCTGTGCGAAATTCCCTTGTTGGAACAGTAGAACAGCGAGGGATATCTGGAGGCCAAAGGAAGCGAGTGAATGTTGGATTGGAAATGGTTATGGAACCCTCATTACTAATCCTGGATGAACCCACATCAGGCTTGGATAGTGCATCATCTCAGTTACTTCTTAGAGCACTTCGACGTGAAGCTCTTGAAGGGGTCAATGTCTGCATGGTAGTTCACCAACCTAGCCACACATTATTCAAGATGTTTGATGATCTGGTACTCCTGGCAAAAGGCGGTCTTACCGTCTACCATGGACCTGTCAATAGAGTTGAAGAATACTTTGCAGGCCTTGGGATCTTTATCCCTGAGCGCATTAACCCCCCAGACTACTTTATCGACATTTTGGAGGGAGTGATAAAACCTAGTGGAAGCTCAGGAGTGGAGTATGACGAGCTCGCAGTTAGATGGATGCTTCATAATGGTTACTCAGTACCTCCTGATATGCAAAAGAGTAACATATCATCCAGGCTTCTAAATCCAATTAATGAAACAAATAACGATGACGCTGTTAATGAGGAATGGTCCTTCACTGGAGAGTTATGGAAAGACGTGAAGGGTAACATAGAGATGCATCAAGAGAAGTTAAAGCTAAACTTTTTGAAGTCCAATGATTTATCAAATCGGAGAACTCCTGGTCTGTTCTGGCAATATAAGTACTTCCTTTCAAGAGTTGCCAAGCAGCGACTTAGGGATGCCAAAGCACAAGCCATTGACTATCTGATTTTATTACTTGCTGGAGCCTGCCTAGGATCAGTTATCAAAATGAGGGACCAAAATCTTGGTGCAGCAGGATACACATACACAGTGATTGCTGTTTCTCTTCTATGCAAAATAGCAGCTTTGAGATCATTTTCTCTGGAGAAATTACAATACTGGAGGGAGAGTGCTTCAGGCATGAGCAGCCTGGCTTATTTTCTCTCTAGGGACACAATTGACCATTTTAATACAGTGATCAAGCCTGCAGTGTATCTATCTATGTTCTTTTTCTTCACTAACCCGAGATCTACTTTTATCACTAATTACACTGTGCTACTCTGCCTCGTGTACTGTGTGACTGGCATGGGTTATGCATTGGCCATTGTTTTTGAACCTGGAGCTGCTCAATTGTGGTCAGTACTTCTCCCAGTTGTTTTGACTCTAGTCGCAACGCAACCGAGAGACAGTGAACTTATTAAGCGCATATCTGACTTGTGCTACACCAAATGGGCTCTGCAGGCATTTGTAATTGCTAATGCTGAAAGGTATGATAAGGTGTGGCTCATAACTCGTTGTGGTGCCCTTATGAAAAACGGCTACAATCTTTCAGATTGGAGTTTGTGCTTATCAATACTTATCCTTTTTGGAGTAGTTAGCCGTGCAATTGCATTCTTCTCTATGTTAATCTTTCGAAGGAAGTAA 3447 0.4262 MRKLHHHISDDLEAFISRRSNPLKFPFFCRTQLRDFDSDQLLQASIRAFADSSPSSRFGCKILWSWLAIVVLSSLSLVRCQVNSGSNPFGDASGALPFMTQLVNVQLSNLTRDLSQEIKSQSSFCVKDPEAEWNKAFNFSSDLSFLTSCIQKTPGDITRRFCTVAEVKSYFRSITEKIGSTSYLKPNRNCNLTSWGSGCEPGWACSADSDEQVDLRTSQDIPARTTNCQACCEGFFCPQGLTCMIPCPLGSYCPLATLNRTTGLCEPYQYRLPANQPNHTCGGAHIWADVDNSEEVFCPAGYYCPSTTKKITCSNGRYCRMGSTSEKRCYNLVSCKSGAESQNLHVYGIMFIVGLSTLLLIIYSCSDQVLSIRERRQAKSRDAAARSVKSSAQARRRWKNAKDAVTRHASRLQSHLSFSFSHQKNGAHSEELQILNQVIPEADDDLLSPLPSNTSRATLDSRNQIETGHGIENDEFDMEDGHRFVTANNSKGKKLHTRSKIFRHAYSQLEKEKAQQQEYKNLTFSGVISMASNSDRRKRPLIEISFKDLSLMLKSQNKYILRCVTGNIKPGHITAVMGPSGAGKTTFLSALAGKALGCKKSGLILINGKNESIHSYKKVIGFVPQDDIVHGNLTVEENLWFNANCRLSAESSKADKVVVVERVIEFLGLHSVRNSLVGTVEQRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNVCMVVHQPSHTLFKMFDDLVLLAKGGLTVYHGPVNRVEEYFAGLGIFIPERINPPDYFIDILEGVIKPSGSSGVEYDELAVRWMLHNGYSVPPDMQKSNISSRLLNPINETNNDDAVNEEWSFTGELWKDVKGNIEMHQEKLKLNFLKSNDLSNRRTPGLFWQYKYFLSRVAKQRLRDAKAQAIDYLILLLAGACLGSVIKMRDQNLGAAGYTYTVIAVSLLCKIAALRSFSLEKLQYWRESASGMSSLAYFLSRDTIDHFNTVIKPAVYLSMFFFFTNPRSTFITNYTVLLCLVYCVTGMGYALAIVFEPGAAQLWSVLLPVVLTLVATQPRDSELIKRISDLCYTKWALQAFVIANAERYDKVWLITRCGALMKNGYNLSDWSLCLSILILFGVVSRAIAFFSMLIFRRK 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2538 1148 FunFam ABC transporter G family member 24 538 780 - -
Lele08g2538 1148 SMART AAA_5 570 762 IPR003593 -
Lele08g2538 1148 Gene3D - 532 779 IPR027417 -
Lele08g2538 1148 CDD ABCG_EPDR 542 768 - -
Lele08g2538 1148 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 544 785 IPR003439 GO:0005524
Lele08g2538 1148 Pfam ABC transporter 564 713 IPR003439 GO:0005524
Lele08g2538 1148 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 301 1135 - -
Lele08g2538 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 544 777 IPR027417 -
Lele08g2538 1148 Pfam ABC-2 type transporter 742 1148 IPR043926 GO:0140359
Lele08g2538 1148 ProSitePatterns ABC transporters family signature. 685 699 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2538 Lele-ChrLele08 31093932 31103813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2538 541 764 Calmodulin-binding Proteins AT2G36910 26.638 1.37e-10 63.9