Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2525 ATGGATGAGAGGGTTTCGTCAGAGAAGTGCTTGGATTCTCAACTATGGCACGCCTGTGCCGGTGCGATGGTTCAAATGCCGCTAATGAATTCGAAGGTCTTCTATTTTCCTCAGGGCCACGCGGAGCACGCTCAGGGGAAGGTAGATTTCGGGTCGTCGTCGACCCGAATTCCTCCTTTCATTCCTTGCAGGGTTTCTGGTATGAAATACATGGCAGACCCTGACACAGATGAGGTGTTTGTGAAAATGAGACTAACCCCTCTGAGAGATAATGAGATGGGCTTTGAAGATGATACTTTTCTGGGCAACCATGGAGTTGAGAATCAAGAAAAGCCAGCTTCTTTTGCAAAGACATTGACTCAATCTGATGCCAATAACGGTGGAGGTTTCTCTGTTCCTCGTTACTGTGCAGAGACCATCTTCCCCAGGTTGGATTATTCCGCAGAACCACCAGTTCAAACCATTATTGCCAAAGATGTTCACGGACAGAACTGGAAGTTTAGGCATATCTATAGAGGGACCCCTCGCCGGCACCTTTTAACAACCGGATGGAGCAATTTCGTGAACCAGAAGAGGCTTGTTGCTGGGGATTCTATTGTGTTCTTGAGGACTGAAAATGGAGATCTTTGCGTCGGAATAAGGAGGGCTAAGAAGGAGATTGGTGGTGGAATTGAGTATCCAACTGGTTGGAATCAGGCAGTTCCATCACTATTTGGTGGGAATTCGGGTTTCATGCGTGAAGATGAGAACTCATTGTTGTGGAGAAAATCTCATGAGGAGATGAAGGGAAGAGTTGCTGCTGAATCTGTTATTGAAGCTGTGACTTCTGCTGTCAATGGCAGGCCATTCGAGATCGTGTACTATCCACGAGCTAGCACGCCGGAGTTCTGTGTTAAAGCCTCGTCGGTGAGGGCTGCAATGCAAATACAGTGGTGTTCTGGGATGAGATTCAAAATGCCTTTTGAAACTGAAGATTCCTCCAGGATCAGCTGGTTCATGGGCACAATATCTTCTGTTCAAGTTGCTGATCGCATTCGTTGGCCTGATTCTCCGTGGCGTCTTCTCCAGGTAGCATGGGATGAACCAGATTTTCTTCAGAATGTTAAGAGTGTAAACCCTTGGTTGGTTGAACTAGTCTCGAATATGCCAACCTTCCATCTCTCTCCGTTCTCGCCACCGAGGAAGAAAACACGGTTTCTACAGCATCCGGAATTCCCTCTCCTCAATCAGCTTCCTATGCCACCGTTCTCAGCCGGAAACCTCCTCAATCAAACTAACAACTCCCCTTGTAACGTTCATGACAGTTATAGTACTGCAGGCATACAGGGAGCCAGGCATGCTCAATATGGTCTCTCTCCATGTGATTTCCCTTTCAACAAGCTGCAATCAGATATGCTTCTCGGCAAACTTCCAAGGCTCAACCACGCTGTCCAGCCTCCTAGACCTCCTCGTAGTGCCTACAATGGCGGCCTGAAGAACGACGCCGAGGTATCGTGCTTGTTGACCATAGGAAATCCCGGCCCGAGCTTGAAGGAACGGGTGGATGCCAAAACACCCCATATCTTGTTGTTTGGTCAACGCATTCACACTGAACAGCAGAGTTCAAACAGTAGCTCTGCTAGTACAACTGGGAATAGTTCGTCCGAAGGGACTTCCCAGAAGGCATCCAATGTTGTTTCCGACGGCTCAGGTTCTGCTCTGCACCAAAACAGTCCGACAGAGAATTCTTCCGAAGGAGGGTCTCCCTGGTACAAAGATCAGCACAGTTCTGATATCGGAACCGAAAACGTTAACCTCTTGTGTTTGGCTTTATAG 1815 0.481 MDERVSSEKCLDSQLWHACAGAMVQMPLMNSKVFYFPQGHAEHAQGKVDFGSSSTRIPPFIPCRVSGMKYMADPDTDEVFVKMRLTPLRDNEMGFEDDTFLGNHGVENQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDVHGQNWKFRHIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRTENGDLCVGIRRAKKEIGGGIEYPTGWNQAVPSLFGGNSGFMREDENSLLWRKSHEEMKGRVAAESVIEAVTSAVNGRPFEIVYYPRASTPEFCVKASSVRAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADRIRWPDSPWRLLQVAWDEPDFLQNVKSVNPWLVELVSNMPTFHLSPFSPPRKKTRFLQHPEFPLLNQLPMPPFSAGNLLNQTNNSPCNVHDSYSTAGIQGARHAQYGLSPCDFPFNKLQSDMLLGKLPRLNHAVQPPRPPRSAYNGGLKNDAEVSCLLTIGNPGPSLKERVDAKTPHILLFGQRIHTEQQSSNSSSASTTGNSSSEGTSQKASNVVSDGSGSALHQNSPTENSSEGGSPWYKDQHSSDIGTENVNLLCLAL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2525 604 FunFam Auxin response factor 311 384 - -
Lele08g2525 604 SMART B3_2 115 217 IPR003340 GO:0003677
Lele08g2525 604 Gene3D - 310 384 - -
Lele08g2525 604 Pfam B3 DNA binding domain 115 216 IPR003340 GO:0003677
Lele08g2525 604 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele08g2525 604 Gene3D - 113 217 IPR015300 -
Lele08g2525 604 FunFam Auxin response factor 113 217 - -
Lele08g2525 604 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 557 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele08g2525 604 MobiDBLite consensus disorder prediction 529 590 - -
Lele08g2525 604 ProSiteProfiles B3 DNA-binding domain profile. 115 217 IPR003340 GO:0003677
Lele08g2525 604 CDD B3_DNA 114 215 IPR003340 GO:0003677
Lele08g2525 604 SUPERFAMILY DNA-binding pseudobarrel domain 101 217 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2525 Lele-ChrLele08 30962560 30964751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2525 7 590 B3 DNA Binding Superfamily AT4G30080 57.912 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele08g2525 B3 3.5e-22 CL0405