Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2524 ATGCGGACTATTCCCTTGGGAATCTCACCATCCCCAACTCCTGTCAACAATTCCAAATCCTCGTCTTCCCTCAATTTCGCTAATTTCAGAAAACCAGGATCTTTCCCGTCAAGTGTTTCTCCTTCCTCCTCTGCTAATGGATTCTCTTTCCTTTCCCTCTGCCAATCAGGACTTTGCAGAGCTAGTCAAGTTGTTGATCTATTCCCAACTATGTCTCCGGAAATCATCGTTCGAGAGGCCAGGTTAGAAGACTGTTGGGAAGTAGCAGAGACTCATTGCAGCTCCTTCTTCCCTGAATATTCATTCCCATTGGACTTTGTTCTGAGAATGGACAGACTGGTGGCAATGTTAGCAGGATTCTCTTTACCAAATGGTTGCAAAAGAACATGTTTGGTTGCTGTTATTGGCAGCTCACTTAATGAAACTCTCTTCATTCGGAGTGAAGATTTCAAGATTAGTGGTCTTGATGGGAGAGTCAGCATCAACAAGGGATATGTGGCCGGTATATTAACGGTAGATACTGTCGCGGACTTTCTCCCCCGAAAAGGACCACTGAGACAGAGAAGGACTGGAATTGCATACATATCCAATGTGGCAGTTCGGGAAAAATTCAGACGCAAGGGTATTGCTAAAAAACTAGTAGAAAAAGCAGAATCTCAGGCCAGAACTTGGGGATGTCGCTCAATCGCATTGCACTGTGATTTGAACAATACTGTAGCCACAAAGCTATACCAAGGTCAAGGCTTCAGATGTATTAAGGTGCCCGAAGGCGCAAACTGGCCCCGGCCGAAGACCTCACCAGATGTTAAGTTCACTTTCATGATGAAGCTTCTCAGTAATTCAACTGCTTCTTAG 855 0.4491 MRTIPLGISPSPTPVNNSKSSSSLNFANFRKPGSFPSSVSPSSSANGFSFLSLCQSGLCRASQVVDLFPTMSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFSLPNGCKRTCLVAVIGSSLNETLFIRSEDFKISGLDGRVSINKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKKLVEKAESQARTWGCRSIALHCDLNNTVATKLYQGQGFRCIKVPEGANWPRPKTSPDVKFTFMMKLLSNSTAS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2524 284 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 282 - -
Lele08g2524 284 Pfam Acetyltransferase (GNAT) family 164 249 IPR000182 GO:0016747
Lele08g2524 284 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 75 276 - -
Lele08g2524 284 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 69 279 IPR016181 -
Lele08g2524 284 Gene3D - 70 261 - -
Lele08g2524 284 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 75 279 IPR000182 GO:0016747
Lele08g2524 284 CDD NAT_SF 191 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2524 Lele-ChrLele08 30952402 30955628 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele08g2524 Acetyltransf_1 4.1e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2603 05 41851392 41853853 Lele08g2524 08 30952402 30955628 hybridization
Lele06g2587 06 33674428 33678693 Lele08g2524 08 30952402 30955628 hybridization