Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2501 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGATTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTGGGCTCTGTGGCACGATGGAGAGACTCTTCTCATCATGGTTCTCGAGAGTTCAGTCGGTGGGGATCGGCCGATTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTTTTCCGAAGATTCTGGTCATGGATATGCACTATCTCGGTCCAGTGACAAGATGCTGGAAGAAGAGAACTGCCGTCCATCTGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAAAATAGAGGATCCTTTAGTCAGAGAGATTGGAGAGGACATTCATGGGAGGCCACCAACGGCTCTCTAAATTTGTCCAGGAGGCCGTCGGATGTGACTATTGACCAGAGGTCAGGTGATGACATGCTAACATATCCTTCTCATCCTCATTCTGATTTTGTAAATACTTGGGATCAGCATCATATGAAAGACCAGCACGATAAGATGGGTGGTGTCAATGGGTTGGGTACTCCACAGAGATTGGATAGGGAGCATTCTCTTGGTTCGATTGGCTGGAAGACTCTTAAATGGACGCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCACACAAGTAGCTCAAGGAGTGGAGGGACAGATTCCAATGAAGCAAAGTCTGAATTGCATCCAAAAAATGCAACTCCTATTGAATCCCATTCCGGGGATGGTGCTGCATGTGCGACATCTTCTGCACCCTCTGAAGATACAATATCTAGGAAGAAGCCTCGGTTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAGAAAATTGAGGAACCTGATATAAGTGCTAGCAAGGATGGCCCTGTCTTGTCTACTAGTAATATTGAGCCCTCTAGTTTTCTTGGTTCAAATTTATTGGATAAAAGCCCAAAAGTTGAAGGCTTTTCAGATTGTGCATCCCCAGCTACTCCATCTTCTGTTGCCTGCAGTTCCTCTCCAGGTGTGGAGGATAAACTGTATGGAAAAGCTGTGAATAGTGACAATGATGTTAGTAATATGAATGGTTCACTGGACCCCGGGCCTGAGAATCATCTACAGACGTTCTCTTTGAATTTAGAGAAGTTGGATATCGACTCCCTGAGTAGTTTGGGTTCTTCACTTATTGGGTTGCTACAATCTGATGACATAAGTTCTGTGGATCCTGGCATATCAAATTCTGCTGCAATGAATAAGTTGCTGATATGGAAAGCTGACCTTTCTAAGGTATTGGAGGTCACTGAAGCTGAAATAGATTTACTTGAAAGTGAGTTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGCCGGTGTCCTGCAGCATTGGCCTCCTCCCTGGTGGCAAACAATACAAAGCCTTGTGAAGAACAAGTTAGAGGCTATGATAAGGTATCCCGGCCAGAGCCATTGCAGGTTTGTTCTTCTGCTGATCCTGATGTGGAGAAGGTGTCCCTTTTAACTAAAGTGCATAATATTCCTGAAAGTGGCAAGGAGGAAGATATTGATAGTCCTGGAACAGCAACTTCTAAATTTGTGGAGCCTCAACCCCTTATAAAAGCAGTCTCTTCATGTGATATAGGGGGAAATTGTAATTGTTCTGGAGGCTTTGATGCCATTCAATCTGCAAGCACTAGATGCTTAGTGCCCTGTTCCACTAGTGAGCAAGCCATGGAGGTAAAAGATGGCATGGGTGCTGCTCCTGGGCCAAGTACTTGCTCTATATCTGAGGATGCATTGTGTAGTGCAATTATTGCTTCTAATAAAGAATATACAAGCAGAGTCTGTGAAGAATTTGCTCAATTATTGCCAAAAGATTGTTGTAAGGTTGGTAATATAGGAGCCATCAATAATTCATGCTCTTCAACTGCCGCAGTTAGAGAAAAATTTGCAGAGAGGAAGCAGTTAGCAAGGATTAAGGAGCGAGTAATAACCCTCCAGTTTAAAGCCTTGCATCATCAATGGAAAGAAGATATGCGATTGCTGTCTGTACGAAAATGTCGCTTAAAATCTCATAAGAAACTTGAAGTAGGCATTCGAACGACTAATAATGGTTTTCAAAAGAATCGGTCCTCCATTCGTTCTCGGATTTCCTACCCTGGAAATAATTTAAGCTTGGTTTCAACATCCGAGATAAATAATTTTGCCAGCAAACTACTCTCTGATCCCCAAGTTAAAGCTTACCGGAGCACCTTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAGATGGTATCGAGGTTTCCATGTAGTAATGGGTTGGTTGAAGATCCTTTGGGGTATGAGAAAGAGAGGGCTATGATCAACCCTTGGACATCAGAAGAGAGAGATATTTTCTTGGAGAAATTTGCTGCTTTTGGGAAAGACTTCTGGAAAATTGCTTCTTTTCTTGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGTTTTGAGAAAATCAAGCAGGATGTTAGGAAGCTAGGGAAGTCGTATTTGACCAACACTGACTTGGTAGCATCAGGTAAAAAATGGAATCGAGAAATAAATGTTGCTTCGCTTGAGATTTTGAGTGCAGCTTCAGTGATAGCAGGCCATGCAGACAGAATAAATGGTAATAAAAAATTGCGTTCAGGAAATTCTCTTCTAGGAGGCTATGGTAATATGAAAAGATCGAAGGGGGAGAATAGCCTCCTGGAGAGATCGAACAGTTTTGATGCTCTTAGGGATGAAAGAGAGGTAGTTGCAGCTGATGTGTTGGCTGGTATATGTGGTTCTATATCATCTGAGGCTATGAGTTCTTGCATAACAAGTTCTGTTGATCCTGTAGAGGGTAGCTGGGAGAGGAGCCTGAAAACAAACCCTGGGAAAAAGCAAGTGTTGATGCCTGTTGTTACTCATAGTGTTGATGGTGATACATGTTCAGATGAGAGCTGTGAGGAGATGGATCCTGCTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCAGGCTGTATCGTCTTATGGGAAGGACTTTGCTAAGATCTCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTGTTCTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTCATGAGGCCCAAGTTTGTAAATGCAGGATACCCAGTGAATGATGATGCAGATGGTGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGATTGGTTCGGCAATTGGCGCTGATAGGTCAGGCACTAGAACTGATGAGGATCAGCCATTGTCTGTCAAGACTGCGTACTCTAATGAATTTAATTCTGTTGAACCCGGGGTCTTGTCAACTGATTTGAATAAATCAAATAATATTGGGGTAGAAGTGGATCAAGATGGTGAAGATGTGGATGATATGGTTTCTGATGCTTGTGAAATGGATGATAAGCCTAAACTGGGCTATGTTGGTGGTGGGGATGTCTTGTACAGTTCTGACAAGTCTGGTCCTGCCAGTGGCCAGACAGCTATGAATATGTTGTTTAGTGTAGAAGTGGGAGAAGATGAAGCAAATAAATTGGCAGGTGCAGTTACAGAGTCTGTACCATACCAATCTAACTCTGTTGCTGAGGCTAAAGTGGTTTCTGAGGTTTCTTCTGGGAGTCTTGGAAAGGAGTTAACAGGGCAGAAACAATCACTGCTTCCATGTCTTGATGATAGGGATAGTAAACGTGAAGCAGTTGCTGATTTAGCTGAATCAAAAAGCTCAGTTCAAGATTCAAGTACAATGGTAAATGCTTCGCCCTTACCTGCAGGCGCTTCTTGTACAGGCTTGAATCTTGAAGTTGATAATAAGCACCAAGCGTCTCTTGGAGAGCCCTGTATATCAGCATTGCCACTGGGGGATATTCAGTCCAATGCAAAATTATTGTTGCAAGATACTATTTCTGTTCATGGTGAGCAAAAAGTTATTCAAGATCACCTGCCTTCTGCACAGAATTGTCAGGGGAGTAGAGATGTGCACTGTCAAAATTCCACTAGCAAAGATGGTCAACATGCTCATATTCCCAGCCGTTTATTGGACCATGTTGAGGCTAGTAGCATCCTGCAAGGCTTTTCCTTGCCCATTAAACAAGAAGTGAAGGGTAATGTTAGTTGCAGCAGTTCAGCATCTGAATTGCCACTCATGTCCCAAAAGACTGAACAAGCCTGTGATCGTTATAAATCAGAGTCACGCCATTCAGTAGATTCTGAAGTGACTTCCAGAAATGGTGATGTGAAGTTGTTTGGGAAGATATTAACCAATCCTTCATCTACTCAGAAATCTAATTTGAATTCCAAGGGACGTGAAGAAACTGGTAACCATCACCCGAAGATGAGTAGCAGCAAGTCTTCCACCCTGAAATTTAATGGTCATTGCCATCAAAATCCTGAAGGAAATTCAACAATTTTAAAGTTCGATTGTGGTGATTACAATATAGGCCTTGAAAATGTTCCAATGAGGAGTTATGGTTATTGGGATGGGAATAAAATACAGACTGGCATTTCTTCATTACCTGATTCTGCTATCTTGCTTAAAAAATATCCTGCTGCCTTTAGTAATTATGCTACATCCTCATCTAAACTGGAGCAACAGTCATTGCATGCGTTTGCCAAGAGTAATGAACAGCACATGAATGGCTCTGCATTCACAACTCGAGAAATCAATAGCGGCAATGGTGTGATTGATTATCAGATGTGTAGGAGTAGGGATGCCCCGAAAGTGCAGCCTTTTATGGTAGACATGAAAAACCGGCAAGATGTGTTTTCTGAGGTGCAGAGAAGAAATGGTTTTGAAGCAATAGCAAATTTACAGCAGCAGGGGAGAGGAATGGTTGGATTGAATGGTGTTGGAAGGCCCGGTATTCGGGTGGGAGGATCACACAGTGGTGTCTCAGATTTTGTGGCAGCCATTAAAATGCATTATTCCAATTCTGACCAGTATGGTGGTCATAATGGAAGTAGCATCATGAGCAAAGATGAATCATGGGGAGGAAAAAAAGGGGACTTAAGCAGGTAG 5082 0.4313 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHGSREFSRWGSADFRRPPGHGKQGSWHLFSEDSGHGYALSRSSDKMLEEENCRPSVSRGDGKYGRNSRENRGSFSQRDWRGHSWEATNGSLNLSRRPSDVTIDQRSGDDMLTYPSHPHSDFVNTWDQHHMKDQHDKMGGVNGLGTPQRLDREHSLGSIGWKTLKWTRSGSLSSRGSGFSHTSSSRSGGTDSNEAKSELHPKNATPIESHSGDGAACATSSAPSEDTISRKKPRLNWGEGLAKYEKKKIEEPDISASKDGPVLSTSNIEPSSFLGSNLLDKSPKVEGFSDCASPATPSSVACSSSPGVEDKLYGKAVNSDNDVSNMNGSLDPGPENHLQTFSLNLEKLDIDSLSSLGSSLIGLLQSDDISSVDPGISNSAAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCRCPAALASSLVANNTKPCEEQVRGYDKVSRPEPLQVCSSADPDVEKVSLLTKVHNIPESGKEEDIDSPGTATSKFVEPQPLIKAVSSCDIGGNCNCSGGFDAIQSASTRCLVPCSTSEQAMEVKDGMGAAPGPSTCSISEDALCSAIIASNKEYTSRVCEEFAQLLPKDCCKVGNIGAINNSCSSTAAVREKFAERKQLARIKERVITLQFKALHHQWKEDMRLLSVRKCRLKSHKKLEVGIRTTNNGFQKNRSSIRSRISYPGNNLSLVSTSEINNFASKLLSDPQVKAYRSTLKMPALILDEKEKMVSRFPCSNGLVEDPLGYEKERAMINPWTSEERDIFLEKFAAFGKDFWKIASFLDHKTTADCVEFYYKNHKSECFEKIKQDVRKLGKSYLTNTDLVASGKKWNREINVASLEILSAASVIAGHADRINGNKKLRSGNSLLGGYGNMKRSKGENSLLERSNSFDALRDEREVVAADVLAGICGSISSEAMSSCITSSVDPVEGSWERSLKTNPGKKQVLMPVVTHSVDGDTCSDESCEEMDPADWTDEERSAFLQAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKFVNAGYPVNDDADGGGSDTDDACVVEIGSAIGADRSGTRTDEDQPLSVKTAYSNEFNSVEPGVLSTDLNKSNNIGVEVDQDGEDVDDMVSDACEMDDKPKLGYVGGGDVLYSSDKSGPASGQTAMNMLFSVEVGEDEANKLAGAVTESVPYQSNSVAEAKVVSEVSSGSLGKELTGQKQSLLPCLDDRDSKREAVADLAESKSSVQDSSTMVNASPLPAGASCTGLNLEVDNKHQASLGEPCISALPLGDIQSNAKLLLQDTISVHGEQKVIQDHLPSAQNCQGSRDVHCQNSTSKDGQHAHIPSRLLDHVEASSILQGFSLPIKQEVKGNVSCSSSASELPLMSQKTEQACDRYKSESRHSVDSEVTSRNGDVKLFGKILTNPSSTQKSNLNSKGREETGNHHPKMSSSKSSTLKFNGHCHQNPEGNSTILKFDCGDYNIGLENVPMRSYGYWDGNKIQTGISSLPDSAILLKKYPAAFSNYATSSSKLEQQSLHAFAKSNEQHMNGSAFTTREINSGNGVIDYQMCRSRDAPKVQPFMVDMKNRQDVFSEVQRRNGFEAIANLQQQGRGMVGLNGVGRPGIRVGGSHSGVSDFVAAIKMHYSNSDQYGGHNGSSIMSKDESWGGKKGDLSR 1693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2501 1693 SUPERFAMILY Homeodomain-like 773 835 IPR009057 -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 290 311 - -
Lele08g2501 1693 Coils Coil 424 451 - -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 33 47 - -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 205 227 - -
Lele08g2501 1693 Gene3D - 767 839 - -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 1670 1693 - -
Lele08g2501 1693 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1007 1056 IPR017930 -
Lele08g2501 1693 CDD SANT 1007 1045 IPR001005 -
Lele08g2501 1693 ProSiteProfiles SANT domain profile. 1006 1053 IPR017884 -
Lele08g2501 1693 ProSiteProfiles Myb-like domain profile. 999 1049 IPR001005 -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 1466 1481 - -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 1443 1481 - -
Lele08g2501 1693 SUPERFAMILY Homeodomain-like 1005 1053 IPR009057 -
Lele08g2501 1693 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1688 - -
Lele08g2501 1693 Pfam Myb-like DNA-binding domain 1006 1046 IPR001005 -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 205 269 - -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 167 186 - -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 78 114 - -
Lele08g2501 1693 Gene3D - 952 1061 - -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 17 151 - -
Lele08g2501 1693 SMART sant 787 835 IPR001005 -
Lele08g2501 1693 SMART sant 1003 1051 IPR001005 -
Lele08g2501 1693 ProSiteProfiles SANT domain profile. 786 837 IPR017884 -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 294 311 - -
Lele08g2501 1693 MobiDBLite consensus disorder prediction 116 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2501 Lele-ChrLele08 30697510 30704585 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele08g2501 Myb_DNA-binding 1.1e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2583 05 41600086 41607154 Lele08g2501 08 30697510 30704585 hybridization
Lele06g2566 06 33408197 33415264 Lele08g2501 08 30697510 30704585 hybridization