Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2492 ATGCATTTGTTTGTTATCTTGTCACTTTCTCTTGTAAATGGAATTTCTGGATATGTTTTTGGTTCTTTTGGTCATTATCATCTGGGGCTGTTTGCCATTTGTTCATTACTTTGGATTCTGTTTCTAGTTCTTCTTTCTATAGGATTGTTGTATATTGATCCTATTTTTGACATGGGGAGGAAAGGGAGTTGGTTTTCTTCAGTGAGGAAAGTTCTCAATCCTCATCCCAAGAAAGATCAGGATAAAAAGCAGAGGTCAAATGAAGTAGTAGGTTATGGCAAAGCTTTGCCAAATGAAGGAGCACAATTTGCTGTTCCTCCTGCTCTTCCATCCACAGGAGCAGAGAATGAGCAGAGCAAGTTTGCTTATTCTCTGGCTCTTGCCACTGCTGCTGCAGCAGAGGCTGCTGCTGCTGCTGCTCAGGCTGCAGCAGAGGTTGTTCGTCTTACTAGCACGTCCCGTTACCGTGGAAAGTCAAAGGAAGACATAGCAGCTATCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGGCTTGAAAGGTTTGGTGAGGTTGAAGAGATTGATAAAGGGGAAATCTGTTAAACGACAAGCAGCTTCTACCTTAAGATGCATGCAGACCCTCACAAGATTGCAGTCTCAGGTCCACGAGAGGAGGGCTAGAATGTCAGAGGAGAACCAAGCTCTTCAGGGGCAGCTGCAGCTGAAACAAGCAAAAGAACTTGAGAAGTTGCAAGCTGCTAATGTGTCCTGTATCATATGCATCTGGCAATCAAAGGAGCAAATTGAAGCTAAACAGTCTAAAAGGCAGGTAGCTGCAGTTCGAAGGGAGAGAGCTATGGCCTATGCATTTTCACATCAGCAAAAGTGGAGGAACTCTTCAAAATCTGCAAACCCCACCACATCTGTGGATCCAATCAATCCACACTGGGGTTGGAGTTGGCTAGATCGATGGGATACCCAAAGTGGTACGGTTCACAGAGAGCGTGCATCGACAAGGAGCATGGCGAGCCAACCCTTGTCTGTTGGAGAAATTACTAAAATATATACTTCTCGCGGTCCTATTCATCACAATAATAGCAAGCCTTCTCCAGTTGGCCAAAAATCAAGCCGGCCCCCAAGTCACCGGTCTTCTTCAACCACACCTCAAAAGGCCCCATCTGTCTCATCTACTTCCTGCAAAGTAAGGGCACCAAGCCCAAAGACATCTTCTTGGGGCCGTGATGATGACTTGAGGAGCACAATTCGTACTCAGTCACATCTGTACCACAGACATACTATTTCAGGATCATCGTTCAGAGATGACGAGAGCATTGCAAGCTCATCTGCCCTCTCAACTTGCACGGTTCCTACCAAGTCAGCTAAGGCCAAATCCAGAATTGAGAGTCCATCACAAAGTTCAGATAAAAGTGGGACACCAGAGAAAGGATCCAATGCGAAGAAGCGATTATCCTTCACAGATTCACCGGCTCGTTTGAGGAATCATTCGGGTCCTCTCGAGGTGGATTTCGTGGCTTCCAATAAGGATGTTGCTTCAGTCACTAAGAAGAAAGTTCCCAATGGTGGCAGTCCTTCAGGTTCCGTAACGATGGCTACACCATTTCTAGCTGGCCTTGCTGTAGCTGCTGCAGCTCTTGCTGGCAGGTATGGCATTCAAGCTTGGCAAGCTTTCAAGGCGCGCCCCCCAAAACCCAGAGTACGTAAGTTCTATGAAGGTGGTTTCCAGCCAACTATGACAAGAAGAGAAGCAGCTCTAATTTTGGGTATCAGGGAAAATGCTCCTCCAGACAAGGTGAAGGAAGCGCATAGAAAAGTAATGGTGGCAAACCATCCAGATGCAGGTGGCAGTCATTATCTTGCTTCAAAAATAAACGAGGCGAAGGACGTGATGCTCGGAAAGACAAAGGGCGGTGGATCTGCATTTTAA 1941 0.4621 MHLFVILSLSLVNGISGYVFGSFGHYHLGLFAICSLLWILFLVLLSIGLLYIDPIFDMGRKGSWFSSVRKVLNPHPKKDQDKKQRSNEVVGYGKALPNEGAQFAVPPALPSTGAENEQSKFAYSLALATAAAAEAAAAAAQAAAEVVRLTSTSRYRGKSKEDIAAIKIQTAFRGYLARRALRGLKGLVRLKRLIKGKSVKRQAASTLRCMQTLTRLQSQVHERRARMSEENQALQGQLQLKQAKELEKLQAANVSCIICIWQSKEQIEAKQSKRQVAAVRRERAMAYAFSHQQKWRNSSKSANPTTSVDPINPHWGWSWLDRWDTQSGTVHRERASTRSMASQPLSVGEITKIYTSRGPIHHNNSKPSPVGQKSSRPPSHRSSSTTPQKAPSVSSTSCKVRAPSPKTSSWGRDDDLRSTIRTQSHLYHRHTISGSSFRDDESIASSSALSTCTVPTKSAKAKSRIESPSQSSDKSGTPEKGSNAKKRLSFTDSPARLRNHSGPLEVDFVASNKDVASVTKKKVPNGGSPSGSVTMATPFLAGLAVAAAALAGRYGIQAWQAFKARPPKPRVRKFYEGGFQPTMTRREAALILGIRENAPPDKVKEAHRKVMVANHPDAGGSHYLASKINEAKDVMLGKTKGGGSAF 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2492 646 SMART iq_5 160 182 IPR000048 GO:0005515
Lele08g2492 646 Pfam IQ calmodulin-binding motif 164 182 IPR000048 GO:0005515
Lele08g2492 646 MobiDBLite consensus disorder prediction 290 311 - -
Lele08g2492 646 CDD DnaJ 591 634 IPR001623 -
Lele08g2492 646 Gene3D DnaJ domain 573 639 IPR036869 -
Lele08g2492 646 ProSiteProfiles IQ motif profile. 161 189 IPR000048 GO:0005515
Lele08g2492 646 PANTHER IQ-DOMAIN 5-RELATED 58 503 - -
Lele08g2492 646 ProSiteProfiles dnaJ domain profile. 587 640 IPR001623 -
Lele08g2492 646 MobiDBLite consensus disorder prediction 357 404 - -
Lele08g2492 646 SUPERFAMILY Chaperone J-domain 577 638 IPR036869 -
Lele08g2492 646 MobiDBLite consensus disorder prediction 448 489 - -
Lele08g2492 646 MobiDBLite consensus disorder prediction 448 499 - -
Lele08g2492 646 FunFam Import inner membrane translocase subunit tim14 573 639 - -
Lele08g2492 646 MobiDBLite consensus disorder prediction 291 311 - -
Lele08g2492 646 Coils Coil 224 244 - -
Lele08g2492 646 MobiDBLite consensus disorder prediction 356 416 - -
Lele08g2492 646 SMART dnaj_3 586 640 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2492 Lele-ChrLele08 30586650 30594300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2492 58 507 IQD Protein Family AT5G03040 41.826 3.35e-91 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2555 06 33288025 33290265 Lele08g2492 08 30586650 30594300 hybridization