Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2489 ATGGAAATGGACTACAAAATCAAGACCACCACTTCACCCTCTTCCTCTCCTCCTCCTCCTCCACCTCCGCCTTCGCCTTCACAACCACAATCGCCGCCGTCTCCGGTGGTGGTTTCGCCTTGCGCCGCTTGCAAGATCCTTCGCCGTCGCTGCGTCGAGAAGTGTGTTCTGGCGCCATATTTCCCGCCGACCGACCCGCTCAAGTTCACCATTGCTCACAGAGTCTTCGGAGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCACAGAGAGCAGATGCAGTGAGCAGCATGGTGTATGAAGCAAACGCGAGGATAAGGGACCCAGTTTATGGTTGTGCTGGAGCCATATGCCAGCTTCAGAAGCAAGTCAGCGAGCTGCAAGGTCAGCTAGCCAAGGCTCAAGCCGAGATGGTCAACATGCAGTGCCAGCAAGCCAACTTGGTGGCTCTCATTTGCATGGAAATGAGCCAATCTCACCCTGAGCCCCACTCCATGATGGTCGCAGCTCATCAGTCGTCTCAGCCACCACAGCACGACGATATAAGCTGCTTGTTAGATGATAACCCCATGAACAACCTCGGCTCGGCTTGGGCTTGGGAGCCACTTTGGACATGA 624 0.5481 MEMDYKIKTTTSPSSSPPPPPPPPSPSQPQSPPSPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQGQLAKAQAEMVNMQCQQANLVALICMEMSQSHPEPHSMMVAAHQSSQPPQHDDISCLLDDNPMNNLGSAWAWEPLWT 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2489 207 Coils Coil 119 146 - -
Lele08g2489 207 MobiDBLite consensus disorder prediction 13 33 - -
Lele08g2489 207 Pfam Lateral organ boundaries (LOB) domain 40 137 IPR004883 -
Lele08g2489 207 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 39 175 - -
Lele08g2489 207 MobiDBLite consensus disorder prediction 1 33 - -
Lele08g2489 207 ProSiteProfiles LOB domain profile. 39 140 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2489 Lele-ChrLele08 30552425 30554104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2489 36 207 AS2 family AT1G07900 66.860 6.71e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele08g2489 LOB 4.4e-41 No_clan