Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2487 ATGGCTGAACCAATTTCATCCTCGGATCTGACTTTCAATGATTTATCATCCGAGTTCGATAACCTCCCTGTTCCATCCATGGAATCGCTCTTTTTCTCCGGCAACGACCATGCCATGCCCTCTGAAGCATTCGCATCAGATCTTGACTTAGCCATGGAGTTCGGGAATGATGGAGATTTTGAGATTTCCTTTGACGATCTCAGCGATCTCCATATTCCTGAAGAAACGGATGATTTCCTACTCCCTGATGGCTATGCTCAACCGCTCGGATCGCATGTGTTACATGACGATGATAAGCAGTTGAACTACTACCGTACCAATTCTGGGTCACCTGACCCGAATAGTTCTTCAGGTTCGGGGAATCGGAATCCTGATGTTGCGGAGTTTTTGAATACACAATCACCTGAGTCCGGCAGTTGCGAGCGTTCTGTTACACACTCTTTGGATAATTCAAGTGATCAGAACTCGCATCATTCACTTCATGTCAAGGTTTCGAGCTTTAAATCGCCAGATTCTGATTCTTGCGACCGGGAATCTTCTGGTGGGTCCATTTCATCACAGGGCTCAGGCAACGGTGGTCTAGGCGACTCGTATGCTTATGAAGTGATGAAAACGTCTTCACCGGATTCTCACTGCGACGACAGAGAAATTTCTTCTCATGGGATTGCTGATCAGAATATAAAATTGGAGGACATGCGTAAAAATTGTGATTTGAAAAGGAACAAGCACCAGAATGAAGGGAATTCTGAGGCGAGAACTACCAAGTACCGGAAGTCGGCGATGCCTACGGTTAATACCAATCAACAGTCTGGTCTTAATGCCGTTGATGACGAGGACGAGAAAAGGAAGGCTAGGCTGATGAGGAATCGAGAAAGTGCCCAGCTTTCCAGACAGAGAAAGAAGCACTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCTACCATAACTGATTTAAGCGGCAAGGTATCGTTTGTTATGGCCGAGAATGCTGCTTTGAGACAGCAATTGAGTACTGGTGGAATGTGTCCGCCACCAGCTCCAGGGATGTACCCTCATCCTCCAATGGCGCCCATGACCTATCCATGGGTGCCTTATGCACCCTATGTTGTCAAACCGCAAGGTTCTCAGGTTCCACTGGTTCCAATCCCCAGATTAAATTCTCAACAGTTGCAATCTGCTCCAAAGGCCAACAAGTCCGAGAATAAGAAGACTGAGGGAAAAACTAAGAAGGTTGCTAGCATTAGTTTGTTGGGTTTGTTTTTCTTTATATTTCTTTTTGGTGGACTCGTTCCTCTAGTTAATGTGAAGTTTGGAGATATAAGGGACAATGTTCCTGTGAGGGCCATTTCTGCTACTGATAGGTTCTGTAGTCAGCACAAAGGAAAAGCTTGGGAGGTTAGTGGTCATAGAAATAAATCTGAAGGAGAAAAGGGAGTAAGATTCTCTAGCGGGAATTTGGGTGTTTCCGACAGAATGTTTATTGAGAAAGGTCGCAAATTAGAAGAAACACTGAGACAGCAGGATTCGCCATATAGAATGAGCTCAGATGACTTTGTTCACAGGGGAAATGCTAGTGAGTCCGAGCCTCTTCTTGCTTCTCTGTATGTTCCAAGGAATGATAAGCTTGTGAAAATTGATGGTAACTTGATAATTCACTCTTTTCTTGCCGCTGAGAAAGCCATGGCATCTGATACTGCTCATACTGAAAAGAGTACGAGAGAAAATGGATTGGTGATTTCTAAAAATTGGGATTCTGCACTGGCTATTCCTGAAGTTGGAAGGAACAAGGTCAACGTCCTCACTCATATAGGAGCCCGCCTGAACAGCGGAAGGCTCTTGCCTCTGGTTCAGCCGAAACATTGA 1872 0.4519 MAEPISSSDLTFNDLSSEFDNLPVPSMESLFFSGNDHAMPSEAFASDLDLAMEFGNDGDFEISFDDLSDLHIPEETDDFLLPDGYAQPLGSHVLHDDDKQLNYYRTNSGSPDPNSSSGSGNRNPDVAEFLNTQSPESGSCERSVTHSLDNSSDQNSHHSLHVKVSSFKSPDSDSCDRESSGGSISSQGSGNGGLGDSYAYEVMKTSSPDSHCDDREISSHGIADQNIKLEDMRKNCDLKRNKHQNEGNSEARTTKYRKSAMPTVNTNQQSGLNAVDDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSGKVSFVMAENAALRQQLSTGGMCPPPAPGMYPHPPMAPMTYPWVPYAPYVVKPQGSQVPLVPIPRLNSQQLQSAPKANKSENKKTEGKTKKVASISLLGLFFFIFLFGGLVPLVNVKFGDIRDNVPVRAISATDRFCSQHKGKAWEVSGHRNKSEGEKGVRFSSGNLGVSDRMFIEKGRKLEETLRQQDSPYRMSSDDFVHRGNASESEPLLASLYVPRNDKLVKIDGNLIIHSFLAAEKAMASDTAHTEKSTRENGLVISKNWDSALAIPEVGRNKVNVLTHIGARLNSGRLLPLVQPKH 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2487 623 Pfam bZIP transcription factor 280 339 IPR004827 GO:0003700|GO:0006355
Lele08g2487 623 Coils Coil 304 324 - -
Lele08g2487 623 MobiDBLite consensus disorder prediction 239 279 - -
Lele08g2487 623 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Lele08g2487 623 SUPERFAMILY Leucine zipper domain 281 339 IPR046347 GO:0003700|GO:0006355
Lele08g2487 623 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Lele08g2487 623 Coils Coil 222 242 - -
Lele08g2487 623 MobiDBLite consensus disorder prediction 176 193 - -
Lele08g2487 623 FunFam bZIP transcription factor 49 280 342 - -
Lele08g2487 623 MobiDBLite consensus disorder prediction 207 226 - -
Lele08g2487 623 MobiDBLite consensus disorder prediction 102 226 - -
Lele08g2487 623 MobiDBLite consensus disorder prediction 239 253 - -
Lele08g2487 623 PANTHER BZIP TRANSCRIPTION FACTOR 60-LIKE 1 593 - -
Lele08g2487 623 MobiDBLite consensus disorder prediction 389 410 - -
Lele08g2487 623 Gene3D - 279 345 - -
Lele08g2487 623 CDD bZIP_HY5-like 282 333 - -
Lele08g2487 623 MobiDBLite consensus disorder prediction 254 273 - -
Lele08g2487 623 MobiDBLite consensus disorder prediction 103 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2487 Lele-ChrLele08 30516438 30518309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2487 1 599 bZIP Transcription Factor Family AT2G40950 40.194 1.11e-81 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele08g2487 bZIP_1 3.1e-11 CL0018