Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2467 ATGTGGTTGGAAGTCCCTATTCCTGAGGTGCTATGCAAGCATTATGGACCAGAAGCAGATGTGTGGAGTGCTGGTATTATCTTATACATCTTACTGAGTGGGGCCCCACCTTTTTGGGCTGAAACCGAGTTAGGAATTTTCAGACAGATTTTACATGGAAAGCTAGATCTTGTGTCTGATCCATGGCCAAGCATCTTAGAAAGTGCTAAAGATTTGGTCAGAAAGACGCTTAACAGGGATCCCGAGAGCAGAATCTCTGCTCATGAAGTTTTATGTCATCCTTGGATCGTCGATGATACTGTTTCGCCTGACAAGCCTCTGGATTCTGCAGTTTTGACACGCAGTGGAACAATAACATTTGAGGAACTCTCAGAAGGTCTAAAGAGAGTTGGTCCTAATCTGATGGAATCTGAAATTAAATCCCTTATGGAAGCGGTAGATGGTAGTGGTTACATCACCATTGATGAGCTTCAACAAGCTTGTGCAGATTTTGGCCTAGGCGATGTACATCTAGATGAAACAATCAAAGAGATTGATCTAGACAATGTTCATAACCTGTGTCATTTGTGCTTGAGGAAAGCGCAGGATGGGAGAATTGATTTTGGAGAGTTCTCGGCAATGATGAAGCAAAGCGATGGTGGCGTTTGTCGGAGCAGAACCATGAACTGCAATTTAAACTTCAATATGGCAGATGCCTTTGGAGTACAAGACTCATCCTAA 720 0.4319 MWLEVPIPEVLCKHYGPEADVWSAGIILYILLSGAPPFWAETELGIFRQILHGKLDLVSDPWPSILESAKDLVRKTLNRDPESRISAHEVLCHPWIVDDTVSPDKPLDSAVLTRSGTITFEELSEGLKRVGPNLMESEIKSLMEAVDGSGYITIDELQQACADFGLGDVHLDETIKEIDLDNVHNLCHLCLRKAQDGRIDFGEFSAMMKQSDGGVCRSRTMNCNLNFNMADAFGVQDSS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2467 239 Gene3D - 148 237 - -
Lele08g2467 239 SUPERFAMILY Protein kinase-like (PK-like) 8 114 IPR011009 -
Lele08g2467 239 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2467 239 Pfam Protein kinase domain 8 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2467 239 Gene3D Transferase(Phosphotransferase) domain 1 7 114 - -
Lele08g2467 239 Gene3D - 115 147 - -
Lele08g2467 239 CDD EFh 147 209 IPR002048 GO:0005509
Lele08g2467 239 SUPERFAMILY EF-hand 114 209 IPR011992 -
Lele08g2467 239 CDD EFh 115 160 IPR002048 GO:0005509
Lele08g2467 239 FunFam Calcium-dependent protein kinase SK5 6 101 - -
Lele08g2467 239 ProSiteProfiles EF-hand calcium-binding domain profile. 146 167 IPR002048 GO:0005509
Lele08g2467 239 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2467 Lele-ChrLele08 30375581 30378922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2467 8 239 EF-hand Containing Proteins AT4G09570 53.376 8.04e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele08g2467 Pkinase 4.5e-18 CL0016