Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2458 ATGCTGGGGAGACCGTTGACCTTGCCTGCACAATCTTGTTGTTGCGCGGTTGATCTTGCTCCTTCTCCACCGTGTGTCATACCATCAAACCCGAGTTTTTCGAGTAGACTTTTACCGAGCTTGAGCAAAGCAGCATGGGCATCAAATGTTTCTATGAAGAAATGGATAATACATTCTGTACAGATAGATGATATGATTACAAGCAAAGAAGATCAGAGTATGTGGGAAGCCTGCAGAGGAGCTCTTTCGACATTTGATTTTAGCGTTGAAGAAAAGGACAAGATACTTGGAAAAGCATTCGGCCTCGTTAATTCACCATATTGGGGAGAAGAACGTGAGAAAGAAATTCCCACATTTGAAACAGTGAATGGAGTATTAGAGTATCTGAGGAGTTTAAGTCTTTCTGATGAAGATTTAACCAAGCTGCTCAAGAAATTCCCTGAGGTTCTTGGATGCAGTTTAGAGGATGAGCTGAAAACCAATGTGAAAATCCTGGAAAAGGAATGGGGTATCAAAGGAAAGTCTCTTCGGAATCTGCTCCTTCGAAATCCGAAAGTTTTGGGTTACAATGTCGATTGTAAGGGAGATTGTATCGCACAATGCACTCGATGCTGGGCTCGTTTCTAG 627 0.4242 MLGRPLTLPAQSCCCAVDLAPSPPCVIPSNPSFSSRLLPSLSKAAWASNVSMKKWIIHSVQIDDMITSKEDQSMWEACRGALSTFDFSVEEKDKILGKAFGLVNSPYWGEEREKEIPTFETVNGVLEYLRSLSLSDEDLTKLLKKFPEVLGCSLEDELKTNVKILEKEWGIKGKSLRNLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2458 208 Pfam mTERF 126 190 IPR003690 GO:0003690|GO:0006355
Lele08g2458 208 Gene3D Transcription termination factor 3, mitochondrial 58 203 IPR038538 -
Lele08g2458 208 SMART mt_12 140 172 IPR003690 GO:0003690|GO:0006355
Lele08g2458 208 FunFam uncharacterized protein LOC106769908 58 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2458 Lele-ChrLele08 30307921 30310367 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele08g2458 mTERF 8.5e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2541 05 41186895 41188285 Lele08g2458 08 30307921 30310367 hybridization
Lele06g2522 06 33016509 33019440 Lele08g2458 08 30307921 30310367 hybridization