Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2455 ATGAACAACTCCACAGAGAACATCCAGCATGTGATGATTAAATCCCTCTCTAATGGACAAGATCACGGTGGTGCCGATGGCGATGCTTGCCTTCGAGCCATGATTCAGAGTGCTGGTCAGGTAAACGCCGCCGTTTTGAACGCCGCAATAGAATTAAACCTCTTTGACATTATTTCTTCAGAATCGTCAAAAGGAGATCATCAGGATGGTTATGTTTCACCCATTGTGATCGCTTCCAGACTCACCTCCCATAAGGGCAAGACCGACGTAATCTCCGGCAGACTCGACCGGATGCTCGGGTTGCTCGCGGCTCACTCGTTCCTCACCTGTTCCGTCAGAACCACCCATGATGGCACCACCAGCCAGAGGCTCTACGCCCTCTCTCCCGCCGGCCAATACTTTGTCTCCAAACAAGATGGTCCTGCTTGGGCTTCCTTGTTTCCCGGCATAGCCTATCATCCTTACATGTCACCCGTTTTTCTGAACTTCAAGGAAGGAGTGCTTATGCTTAATGGGGGCGAAGACCTGAGCAAGATAGTTCATGGGAAAAGTACGTACGAGTACATGAAAAAAGATCCTGCACTGAAACAAAAGTTCCAAAGAGCCATGGCTGATCAGTCTGCTTTATACATGGAGAAGATTCTGGAGATTTACAAAGGTTTTGATGGATTATCGACTCTCGTTGATGTTGCTGGCGGTACTGGCCAGTGCCTTAATATGATCGTCTCCAAGTACCCTTCCATTAAGGGTATTAACTTTGATTTGCCCCATGTCGTTCAAGATGCCCCAACCCATCCAGGAATAAAGCATGTTGGAGGAGACATGTTCAAAAGTATTCCAAGATGTGATGCTACAATGATGAAGAGCACGATTCATAACTGGTCAGATGAAAAGTGCATGGAGATACTGAGGAATTGCCAGGAAGCTTTGAATGAAGGAGGGAAGGTGATAGTGATAGATATGATAAAGCAGCAAGAACCAGAGATAAGCAATGCTGCAAAGAATGTGGCCATTGCTGACTTAGTAATGTTCTCTCAAGGAGGAGGACTTGAAAGAACTGAGAAACAATTTGAGGCTTTGTGTAAAAAATGTGGCTTTTCTAGGTTTCATCTTGCTTGTCGTGTTCTCTCCATTGTAGGTGTCATGGAGTTTTACAAGGATTAG 1164 0.4579 MNNSTENIQHVMIKSLSNGQDHGGADGDACLRAMIQSAGQVNAAVLNAAIELNLFDIISSESSKGDHQDGYVSPIVIASRLTSHKGKTDVISGRLDRMLGLLAAHSFLTCSVRTTHDGTTSQRLYALSPAGQYFVSKQDGPAWASLFPGIAYHPYMSPVFLNFKEGVLMLNGGEDLSKIVHGKSTYEYMKKDPALKQKFQRAMADQSALYMEKILEIYKGFDGLSTLVDVAGGTGQCLNMIVSKYPSIKGINFDLPHVVQDAPTHPGIKHVGGDMFKSIPRCDATMMKSTIHNWSDEKCMEILRNCQEALNEGGKVIVIDMIKQQEPEISNAAKNVAIADLVMFSQGGGLERTEKQFEALCKKCGFSRFHLACRVLSIVGVMEFYKD 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2455 387 CDD AdoMet_MTases 226 322 - -
Lele08g2455 387 Pfam Dimerisation domain 45 103 IPR012967 GO:0046983
Lele08g2455 387 Pfam O-methyltransferase domain 176 367 IPR001077 GO:0008171
Lele08g2455 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 374 IPR029063 -
Lele08g2455 387 FunFam Caffeic acid 3-O-methyltransferase 15 134 - -
Lele08g2455 387 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 386 IPR016461 GO:0008168
Lele08g2455 387 Gene3D - 43 214 IPR036388 -
Lele08g2455 387 PANTHER O-METHYLTRANSFERASE 40 384 IPR016461 GO:0008168
Lele08g2455 387 Gene3D Vaccinia Virus protein VP39 196 375 IPR029063 -
Lele08g2455 387 PIRSF O-mtase 12 386 IPR016461 GO:0008168
Lele08g2455 387 SUPERFAMILY "Winged helix" DNA-binding domain 28 138 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2455 Lele-ChrLele08 30281606 30284270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2455 25 386 Monolignol Biosynthesis Gene Families AT5G54160 42.149 5.74e-90 274