Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2449 ATGGAGGAAAAGGAGAGTTTTGGTTCTGGGCTTCTACTGAAGGATAGTGATGCCTCGGACAGCTTCCACATAGCTTCGAGGAATGAAAACTCCGATCAGTTCACCGGCGGGACCGAAGCGGCCACTCTGGCACCTTTAAGTGCTCCATCGACGGTGACGGGGACGGCGACTCCAGCCACGGATGTTAAGAAGAAGAGAGGGAGGCCAAGGAAGTATGCTACCGATGGCTCAATGGCGTTGGTGTTGTCTCCGATGCCGATTTTGTCATCAATTCCGTTGACCGGTGACTTCTCCGGTTGGAAGCGGGGCAGATGGGGTCTGTTGAATCGACGAAGAAGTCGTTTAATAACACTACTTCTTCGTATGCCTATTTTCACCATGGAAGCACTCGCTATAGCTTTGTGCCCCGCCGCTTATACTCAGCCTTGTTTCCCTTTCAATTTTTCTCTTTCTCTACCATTTACAACTCAAAAATCTGTAGCACAAGTCACCCTTCAGAAAACTGAAGCTCGGAAGGTCCATGCTGGAGTTGTAGCTGATGAGTCTTCTTTTTTCAGTCGGTCTTTTCATCAATCACACGGTCATGTTGGGAGGTCCCATCAAGTGATCACTGATGTTCTTAGAAAATGCAATGTGCCAGTCATAAAAGTTGATGGCCATGAAGCCGATGATGTTGTTGCCACACTTGTTGGACAAGTTCTTGATAGAGGTTTTCGGGTTGTAATTGCCTCTCCCGATAAGGATTTTAAACAGCTCATTTCTGAAGATGTGCAAATTGTTATGCCTTTGCCAGAGTTAGAAAGGTGGTCCTTCTACACCCTGAGGCACTACAGAGCTCAATATAACTGCGACCCACAATCTGATCTGAGCCTTCGTGACTACTGCCTTTATTATGTAGGATGCATTGTAGGTGATGAAGTTGACGGCGTTCCTGGTATCCAACATGTGGTCCCCGATTTTGGTCGGAAGACTGCTCTAAAACTTATTAAAAAGCATGTTACGTTGGAGACATTGTTAAACGCAGCTGCAGTACGGACTGTGGGAAGGCCGTATGCCCAGGAAGCGCTTACAAAGTATGCTGATTACCTTCGACGAAACTATGAAGTTCTGGCCTTGAAAAAGATATCCAACTTCATGAGGATTGTTGTGGAAGATACGTCCTACTTGGCACTTCCCAATGGGGCCAAACACCATTCTCTAGTTGAAAGTATTGCAAGCTATGTCTGA 1227 0.4654 MEEKESFGSGLLLKDSDASDSFHIASRNENSDQFTGGTEAATLAPLSAPSTVTGTATPATDVKKKRGRPRKYATDGSMALVLSPMPILSSIPLTGDFSGWKRGRWGLLNRRRSRLITLLLRMPIFTMEALAIALCPAAYTQPCFPFNFSLSLPFTTQKSVAQVTLQKTEARKVHAGVVADESSFFSRSFHQSHGHVGRSHQVITDVLRKCNVPVIKVDGHEADDVVATLVGQVLDRGFRVVIASPDKDFKQLISEDVQIVMPLPELERWSFYTLRHYRAQYNCDPQSDLSLRDYCLYYVGCIVGDEVDGVPGIQHVVPDFGRKTALKLIKKHVTLETLLNAAAVRTVGRPYAQEALTKYADYLRRNYEVLALKKISNFMRIVVEDTSYLALPNGAKHHSLVESIASYV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2449 408 Gene3D - 296 370 - -
Lele08g2449 408 Pfam 5'-3' exonuclease, N-terminal resolvase-like domain 198 261 IPR020046 GO:0003677
Lele08g2449 408 SUPERFAMILY PIN domain-like 200 280 IPR029060 -
Lele08g2449 408 PANTHER FLAP ENDONUCLEASE XNI 195 374 IPR038969 GO:0017108|GO:0033567
Lele08g2449 408 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 299 373 IPR036279 -
Lele08g2449 408 Gene3D - 187 282 - -
Lele08g2449 408 MobiDBLite consensus disorder prediction 45 71 - -
Lele08g2449 408 FunFam 5'-3' exonuclease family protein 282 370 - -
Lele08g2449 408 SMART 53exo3 141 389 IPR002421 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2449 Lele-ChrLele08 30215437 30221809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2449 39 110 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 52.055 2.85e-12 65.9