Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2446 ATGCAAATTGCCTCTTCCCTCGTCTATAAATTCTTCAGCCCTCTCCTTCAACATCCATTCAACCAAACAACACTGATCATCACTTCGCTTGTTTTGCTCTCTCTCTCTCTCTCTTCTTCCATGGCTACTAAGCAAACCGATATGGTTAAGCCTTCTTCTCTGCAGGTTGAGCCTGCTGCATCTCCGCCGGAGTCCAGTCCTTTCCGAAAAATCGTTGTCGTTGCTTCCATTGCCGCCGGGATTCAATTCGGATGGGCTCTTCAGCTCTCCTTGTTAACTCCCTATGTCCAGCTTCTCGGTATTCCCCATACCTGGGCCGCTTTCATCTGGCTCTGTGGTCCCATCTCCGGTATGTTAGTTCAACCGATTGTTGGTTACCACAGTGACCGATGCACCTCCCGGTTTGGCCGCCGGCGTCCGTTCATCGCCGTCGGTGCATTCGCCGTGGCTATCGCTGTTTTCTTGATCGGTTACGCCGCTGACATGGGCCACAGGTTTGGTGACTCGTTGGAGAAGAAAACGCGTCCGCGAGCCATCGCGATCTTCGTCGTCGGATTCTGGATCCTCGACGTGGCCAATAACACGCTACAAGGACCATGTAGAGCTCTATTAGCCGACCTCGCCGCCGGCGACCAGCGTAAGACGCGGACGGCGAACTCGTTCTTCTCGTTCTTCATGGCCGTCGGGAACGTGCTTGGGTACGCCGCCGGATCGTACAGTAAGCTCCACAACGTGTTTCCGTTCACGAAAACCAAAGCCTGCGACGTGTACTGCGCGAACCTGAAGAGTTGCTTCTTCCTCTCCATCGCTCTTCTGCTCGTTCTCTCAATCGCCGCTCTGACCTACGTGAAGGAGAAGGCCCTTGAGAAAGCAACTGGCGGGAATGAGGGGGAAAATGATTCGGTGGGCGAGGGAACAGGAGGGTTCCAGTGCTTCGGACAAATGTTCGGTGCGTTCCGTGACCTGAAGAGGCCCATGTGGATTTTACTCCTGGTGACGTGTCTCAACTGGATTGCTTGGTTCCCTTTCTTGTTGTTCGACACGGATTGGATGGGTAGGGAGGTGTACGGTGGAACGGTTGGTGCAGGTAGGGCGTACGATAAGGGAGTGCGAGCGGGTGCATTGGGTCTTATGCTCAACTCCGTTGTGCTTGGCGTGGTGTCGTTGGGCGGGGAGGTGTTGGCGCGTGGGGTTGGTGGCGTGAAGAGGTTATGGGGAATCGTTAACTTCATTCTCGCCATATGTTTGGCCTTGACGGTGTTGATCACCAAGTTGGCCGAGCACTCACGGCAGTTCGCCCCCGGCTCTACCGATCCTCTGCCACCTTCCACCGGGATTAAGGCCGGCGCGTTAACTCTCTTCGCAGTGCTCGGAATTCCACTAGCGATTACGTACAGTATCCCTTTTGCACTAGCATCCATATTCTCTAGCTCTTCAGGGGCAGGCCAAGGGTTATCTTTGGGTGTTCTTAATCTGGCAATTGTCGTCCCACAGATGTTTGTGTCTGTGGCGAGTGGACCGTGGGACGCGGCATTCGGTGGTGGTAACCTACCGGCTTTTGTGGTGGGTGCCATCGCTGCTGCGATCAGCGGTATATTATCGATAGTTGTGTTGCCGTCACCACCACCGGACTTGGCAAAGACGATGAACACAGCTGGAGGCTTCCATTAG 1671 0.5458 MQIASSLVYKFFSPLLQHPFNQTTLIITSLVLLSLSLSSSMATKQTDMVKPSSLQVEPAASPPESSPFRKIVVVASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAVGAFAVAIAVFLIGYAADMGHRFGDSLEKKTRPRAIAIFVVGFWILDVANNTLQGPCRALLADLAAGDQRKTRTANSFFSFFMAVGNVLGYAAGSYSKLHNVFPFTKTKACDVYCANLKSCFFLSIALLLVLSIAALTYVKEKALEKATGGNEGENDSVGEGTGGFQCFGQMFGAFRDLKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGAGRAYDKGVRAGALGLMLNSVVLGVVSLGGEVLARGVGGVKRLWGIVNFILAICLALTVLITKLAEHSRQFAPGSTDPLPPSTGIKAGALTLFAVLGIPLAITYSIPFALASIFSSSSGAGQGLSLGVLNLAIVVPQMFVSVASGPWDAAFGGGNLPAFVVGAIAAAISGILSIVVLPSPPPDLAKTMNTAGGFH 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2446 556 FunFam Sucrose transport protein 65 538 - -
Lele08g2446 556 SUPERFAMILY MFS general substrate transporter 69 543 IPR036259 -
Lele08g2446 556 Pfam MFS/sugar transport protein 80 337 - -
Lele08g2446 556 PANTHER SUGAR TRANSPORTER 67 536 - -
Lele08g2446 556 TIGRFAM GPH_sucrose: sucrose/H+ symporter 67 543 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lele08g2446 556 Gene3D MFS general substrate transporter like domains 68 291 IPR036259 -
Lele08g2446 556 CDD MFS_SLC45_SUC 71 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2446 Lele-ChrLele08 30196573 30198984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2446 41 556 Sucrose Transporter Gene Family AT1G71890 66.985 0.0 702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2530 05 41074759 41077180 Lele08g2446 08 30196573 30198984 hybridization
Lele06g2510 06 32903584 32905993 Lele08g2446 08 30196573 30198984 hybridization