Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2434 ATGGATAAGTCAGATGAAGTTTCGGATTTGGAGTGGATTCGTCGATATCTTCTTGGTGAGTTTTCGTCCTCGGAATCCTTCTTATCCAATCTGTATCCTGTTAAGCTCGAGGATTCTTCGTCGGAGTTTGATCTGAGTCCGTGTGTTCCGGTGCAAAGTTTCTATTCTTCTGGTGAGACTTTTGGTTTTGAAGATGGGGAGGTTTTGATGAACTCCGTGTCGGAGGTCGAAGTGGAGAAGAAGAAGCCGGCCATGTCATCGCCTGAGACTGATGAGAAGACCGACGAGTGCGATGAGCCGATTATGATGAGGAGGTACAGGGGCGTTCGGAGGAGACCGTGGGGAAAGTTTGCAGCGGAGATCCGTGACCCGACCCGGAAAGGGACACGGGTTTGGTTGGGTACGTTTGATAGTGAGATTGATGCTGCGAAGGCTTATGATTGCGCTGCGTTCAGAATGAGGGGTCGAAGGGCAATATTGAACTTTCCTCTGCAGGCCGGTGAATGTGATCCGACGCCCAACCGGTGTGGCCGGAAAAGGAGAAGAGAAAGTTACCCGGAGGAGTTGTCCCAAATTTCCCGTGAATTATAA 591 0.5025 MDKSDEVSDLEWIRRYLLGEFSSSESFLSNLYPVKLEDSSSEFDLSPCVPVQSFYSSGETFGFEDGEVLMNSVSEVEVEKKKPAMSSPETDEKTDECDEPIMMRRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDSEIDAAKAYDCAAFRMRGRRAILNFPLQAGECDPTPNRCGRKRRRESYPEELSQISREL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2434 196 FunFam Ethylene-responsive transcription factor 2 104 165 - -
Lele08g2434 196 PRINTS Ethylene responsive element binding protein signature 145 165 IPR001471 GO:0003700|GO:0006355
Lele08g2434 196 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Lele08g2434 196 CDD AP2 113 163 IPR001471 GO:0003700|GO:0006355
Lele08g2434 196 ProSiteProfiles AP2/ERF domain profile. 105 163 IPR001471 GO:0003700|GO:0006355
Lele08g2434 196 MobiDBLite consensus disorder prediction 168 196 - -
Lele08g2434 196 SMART rav1_2 105 169 IPR001471 GO:0003700|GO:0006355
Lele08g2434 196 Pfam AP2 domain 105 155 IPR001471 GO:0003700|GO:0006355
Lele08g2434 196 Gene3D AP2/ERF domain 104 165 IPR036955 GO:0003700|GO:0006355
Lele08g2434 196 SUPERFAMILY DNA-binding domain 105 164 IPR016177 GO:0003677
Lele08g2434 196 MobiDBLite consensus disorder prediction 173 196 - -
Lele08g2434 196 PANTHER DNA-BINDING DOMAIN 84 178 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2434 Lele-ChrLele08 30052566 30053156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2434 1 191 AP2-EREBP Transcription Factor Family AT5G07580 43.284 2.57e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g2434 AP2 3.8e-14 CL0081