Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2430 ATGCTTTATGCAGTCTGTGTTGTAATAGTGAATTTGGAGACTGTAGTAATATTAGTTGCAGTTTGGTACATATTCAAGGGTAATGAGATCATAAGTAAGGACCCGTTAGGCTCAACTGTATTGCAGGTGAAAAGACATTGGCCTAAGGTTTCATCTCTACGCATAGCCGTTTCTACAAGGCCTCGGCTTCGTCGTTTGTACCTATTTGACTTGGAGAACACCAATCAAGAGCTAAAAGGTGACCTGAAAGATCTCTACATAAATCAAGCAGGCCAAATTGATGTCTCTGGAAATCGCAAGGCTGTAGTTATCTATGCGCCTTACAGGATTGTGCGGCCACCAAAGAAAGGCTCTGCCGTCCAGCGACCACGCTCTCGCACATTAACTGCTGTTCATGGTGCGCATCCTGCCGAGATTGTTGGCAAGCGAATCAGATTCCATGTCGATGGATCGACGATAATGAAGGCATGTCATTGCTTTGTGTAA 486 0.4465 MLYAVCVVIVNLETVVILVAVWYIFKGNEIISKDPLGSTVLQVKRHWPKVSSLRIAVSTRPRLRRLYLFDLENTNQELKGDLKDLYINQAGQIDVSGNRKAVVIYAPYRIVRPPKKGSAVQRPRSRTLTAVHGAHPAEIVGKRIRFHVDGSTIMKACHCFV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2430 161 Coils Coil 68 88 - -
Lele08g2430 161 Pfam Ribosomal protein S7e 68 112 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele08g2430 161 PANTHER 40S RIBOSOMAL PROTEIN S7 68 109 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2430 Lele-ChrLele08 30022947 30026974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2430 68 155 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 55.556 9.04e-40 131