Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2413 ATGGAACCACTAGCCACCGCCACCACTCCGCCAACCTACCGCGGTGTTCGCATGCGAAAATGGGGAAAATGGGTCTCCGAAATCCGGGAGCCCGGCAAGAAGACCCGGATATGGTTAGGGAGCCATGACACGCCAGAGATGGCTGCAGCTGCATACGACGTAGCAGCTCTACATTTTCGAGGCCAAGCCGCACGGCTCAACTTCCCGGAGCTCATCGGCAGCTTGCCCCGCCCGGCAAGCTCTCGACCTGAGGATGTGCAGCTGGCAGCACAGCAAGCAGCAGCATTGACGTTAAGGAGACCGGTGATCAGAGGGCCGTCAGAGGCCGCTGGAGGGACTACGTGTACAGTGGTACGGCCGCCGGCGATGGTGGGGCTGTCACTGAGCCAAATTCAAGCTATAAATGAGTCACCATTGGATTCACCAAAGATGTGGATGCAAATGGCTACTGAAGCTGAAGTAATGCTAGGGTTTGTTGGATTGTCTAATGATGAAGACGAGGATGATGTATTAGGGTTAAGTGAATTAGAAGAAACGCAGCATCATGAATCCATTTGGGACTTCTAA 567 0.5414 MEPLATATTPPTYRGVRMRKWGKWVSEIREPGKKTRIWLGSHDTPEMAAAAYDVAALHFRGQAARLNFPELIGSLPRPASSRPEDVQLAAQQAAALTLRRPVIRGPSEAAGGTTCTVVRPPAMVGLSLSQIQAINESPLDSPKMWMQMATEAEVMLGFVGLSNDEDEDDVLGLSELEETQHHESIWDF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2413 188 CDD AP2 13 71 IPR001471 GO:0003700|GO:0006355
Lele08g2413 188 Pfam AP2 domain 11 61 IPR001471 GO:0003700|GO:0006355
Lele08g2413 188 Gene3D AP2/ERF domain 12 70 IPR036955 GO:0003700|GO:0006355
Lele08g2413 188 PRINTS Ethylene responsive element binding protein signature 51 71 IPR001471 GO:0003700|GO:0006355
Lele08g2413 188 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Lele08g2413 188 FunFam Ethylene-responsive transcription factor 2 12 70 - -
Lele08g2413 188 SUPERFAMILY DNA-binding domain 12 70 IPR016177 GO:0003677
Lele08g2413 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 129 - -
Lele08g2413 188 SMART rav1_2 12 75 IPR001471 GO:0003700|GO:0006355
Lele08g2413 188 ProSiteProfiles AP2/ERF domain profile. 12 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2413 Lele-ChrLele08 29868756 29869322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2413 10 147 AP2-EREBP Transcription Factor Family AT1G71450 57.971 2.40e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g2413 AP2 7.8e-14 CL0081