Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2398 ATGAGTTGTAATGGATGCCGAGTTTTGAGAAAAGGTTGCAGTGAGAATTGCAGTATAAGGCCGTGTTTGCAGTGGATTAAAAGCCCTGAGTATCAGGCAAATGCTACTGTGTTTCTCGCCAAGTTCTACGGCCGAGCTGGGCTCATGAACCTCATCAACGCCGGTCCTGAACACCTTCGTCCTGCGATTTTTCGGTCTTTGCTATACGAGGCATGCGGTCGGATAGTTAACCCGATTTATGGGTCCGTCGGTTTGTTATGGTCCGGGAGTTGGCAGCTCTGTCAGGCCGCCGTGGAAGCCGTCTTGAAGGGTGCTCCGATCACGCCGATCACCTCCGAGGCGGCCACCAACGGGAGGGGCCCACCTCTCAAGGCTTACGACATACGCCACGTGTCCAAGGACGAGAACGTGGCCGCGTCAAACGATGCTCAACGAGTCGTCAAGACTCGCTCGACGTTCAAGCGCTCCAACGACAACAAAGCAGCAACCGGCTCGTTATTGGCTGAGCCCGCTCCTGCAGTACTTGACGCTCCAATCAATTCCTGGACCGGATGTTTCTCTGCTAAACCGGTTGTGCACCGGTCGGGAAGTCACGAGTCATCGCTGAGCCACCAGTCGGAGGCGGTGAACGATGGCAGAGAGAGAGAGAGCGAGAGCATGATCTCCGTGGAGACCGCCGAGACATCGATCCTCTTCCGAGACAAGCCGGAATCCACCGGGAGGGCTAGTGAGCGAACCGTCGATGAAACAACCGATATAGACCTAGAGTTGACACTAGGGTTCGAACCAACGCTACGTGCGAACCTCGTGGTACCAGTGAAGAAGAGGAAGATCGAGTTCCAGAATGGTGAAAACTGGTCATCATGCAAAATGGACCTCGGACTTGAGTTCTCGGGTTGA 900 0.5478 MSCNGCRVLRKGCSENCSIRPCLQWIKSPEYQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAATNGRGPPLKAYDIRHVSKDENVAASNDAQRVVKTRSTFKRSNDNKAATGSLLAEPAPAVLDAPINSWTGCFSAKPVVHRSGSHESSLSHQSEAVNDGRERESESMISVETAETSILFRDKPESTGRASERTVDETTDIDLELTLGFEPTLRANLVVPVKKRKIEFQNGENWSSCKMDLGLEFSG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2398 299 PIRSF AS2 1 298 IPR017414 -
Lele08g2398 299 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Lele08g2398 299 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lele08g2398 299 MobiDBLite consensus disorder prediction 195 222 - -
Lele08g2398 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2398 Lele-ChrLele08 29692665 29693681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2398 1 295 AS2 family AT3G02550 55.705 1.35e-102 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele08g2398 LOB 2.6e-24 No_clan