Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2392 ATGGAAGATATCGATTACCATACTAAAAATCCAATCGATACAGCAACGCCGACGGCGTCTCTGAAGCTGTTTGGCATTAACATCCACAAAGTTTCAGAATCCGGTGAGGCCTTGAACTCCGGCAACTATCAACGGAAATACGAGTGCCAGTATTGCTGTCGTGAGTTTGCCAATTCACAAGCATTGGGAGGCCATCAAAACGCACACAAGAAAGAAAGACAGCTTCTAAAGCGAGCTCAAATGCAAGCTGCTCGTACTGCTTTTGATGCTTCACATCATAGTTATATCTTCATAGGATCGCCGCCTCCCCCACTACCGCCACCGCGGTCTCCATGGCCGTACAGTGGGTCACATAATCCACCACCATCTTCGGTGTATCATTCTGCAGCGGCATCCGCTGTGCGTGTGAATTCTGGTTTTGCAGCAGGTCTTCATAATCCTTCACCACCGTCATCTATGGTGGCATACGGTGGCTTTACTGGCAGCGATGGTGGCGAACGAGGAGGCTTGAGTTTGGATTTGCAACTTAGTCTATGA 537 0.4879 MEDIDYHTKNPIDTATPTASLKLFGINIHKVSESGEALNSGNYQRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARTAFDASHHSYIFIGSPPPPLPPPRSPWPYSGSHNPPPSSVYHSAAASAVRVNSGFAAGLHNPSPPSSMVAYGGFTGSDGGERGGLSLDLQLSL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2392 178 SUPERFAMILY beta-beta-alpha zinc fingers 44 74 IPR036236 -
Lele08g2392 178 Gene3D Classic Zinc Finger 27 95 - -
Lele08g2392 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Lele08g2392 178 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Lele08g2392 178 PANTHER ZINC FINGER PROTEIN 5 1 178 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2392 Lele-ChrLele08 29601779 29602315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2392 15 85 C2H2 Transcription Factor Family AT1G67030 69.231 7.05e-29 104