Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2371 ATGGCTTTACAAAACATTGGAGCTGCAAACAGTGATGATGCCTTCTACAGGTATAAGATGCCCAAAATGATTACCAAAATTGAGGGCAGAGGTAACGGCATCAAAACCAACATAGTTAATATGGTTGATATTGCGAAGGCTTTGGCAAGGCCAGCTTCTTACACAACCAAGTATTTTGGTTGTGAGCTTGGAGCTCAATCCAAATTTGACGAGAAAACCGGGACTTCTCATGTTAATGGGGCACATGATACTGCAAAACTTGCTGGACTTCTGGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGCGGGAATCCTGAAACTGAGATCCTGATCACCAAGAGTCAAATGATCCAGCTGAAGTGTGCCGCTTGTGGCTTTGTGTCAGATGTGGATATGAGAGACAAACTGACCACCTTTATTATCAAGAATCCTCCCGAACCCAAGAAAGGGTCGAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAAAGGCTGAAAGAAGGCGAAGCAGCTGATGAGGAAATGAAAAAATTAAAAAAAGATGGCAAGAAGAAGGGTTCTATCTCTTTCAAGGATGGAACTACAAAATCAAAAAAGAAATCCAATAGCTCTGATGAAGACCGGGCATCACCCACTCATGGTAAGATTCATGAGAAGCCTCGTGTTGAAGAGGAGGAGGAAGGTGATGTCCAATGGCAAACAGATACATCAGTGGAGGCTGCTCGCCAACGTATCCAGGAACAGTTAAGTACTGTGACAGCTGATATGGTTATGCTCTCCACAGGCGAGCCAGAGAAGAAGGCAAAAGCAGCAGATAAGGTAAATGGTGGGTCTGAGAATGGGAACTCAATGCCCTACAGGTCTCTTGTTGAGGAAGTCAAATGTAATTTAAAGAAGGGGGTATCTGCAAAGGAACTGCAGCACCATTTAGCAGCCCTTACTGCATCTTCGCAGGAAAAAATGAGTGCTTTATATGAGGCCCTTGTAGGCGGTGTCGAGAAAGGATTTGCGAAGGAAGTGGTCAAGAAGAGGAGCTACCTTGCTGCTGCTCTTGCTGGGGAAGAAGGATCGCAGATGCTATTGCTCCATGCAATCGAGGACTTCTGTTGCAAAAGCGGTTCTAATGCTTTGAAGGAGGTGGCCTTAGTGCTGAAGGCGCTCTACGATGCTGATGTGCTGGAGGAAGAGCACATAGTGCAATGGTATCAGAAAGGGCTCAAGGGAGATTCCAAGGACTCCAAGATGTGGAAGAATGCTCAGCCATTCATTGAATGGCTTCAAAATGCAGAATCAGAATCGGAGAGGGAGTAA 1317 0.4525 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEILITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEPKKGSKDKKAMRRAEKERLKEGEAADEEMKKLKKDGKKKGSISFKDGTTKSKKKSNSSDEDRASPTHGKIHEKPRVEEEEEGDVQWQTDTSVEAARQRIQEQLSTVTADMVMLSTGEPEKKAKAADKVNGGSENGNSMPYRSLVEEVKCNLKKGVSAKELQHHLAALTASSQEKMSALYEALVGGVEKGFAKEVVKKRSYLAAALAGEEGSQMLLLHAIEDFCCKSGSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDSKDSKMWKNAQPFIEWLQNAESESERE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2371 438 Coils Coil 428 438 - -
Lele08g2371 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Lele08g2371 438 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Lele08g2371 438 Gene3D - 105 145 - -
Lele08g2371 438 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Lele08g2371 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 360 438 IPR003307 GO:0005515
Lele08g2371 438 ProSiteProfiles W2 domain profile. 278 438 IPR003307 GO:0005515
Lele08g2371 438 Gene3D - 280 429 - -
Lele08g2371 438 Gene3D - 2 104 - -
Lele08g2371 438 CDD W2_eIF5 290 436 - -
Lele08g2371 438 FunFam Eukaryotic translation initiation factor 5 284 429 - -
Lele08g2371 438 SMART 542_3 347 434 IPR003307 GO:0005515
Lele08g2371 438 MobiDBLite consensus disorder prediction 148 229 - -
Lele08g2371 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 436 IPR045196 GO:0003743|GO:0006413
Lele08g2371 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Lele08g2371 438 SUPERFAMILY ARM repeat 288 432 IPR016024 -
Lele08g2371 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Lele08g2371 438 MobiDBLite consensus disorder prediction 143 234 - -
Lele08g2371 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Lele08g2371 438 MobiDBLite consensus disorder prediction 266 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2371 Lele-ChrLele08 29351090 29352406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2371 1 431 Eukaryotic Initiation Factors Gene Family AT1G77840 62.759 0.0 516