Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2355 ATGACCGGAAAACCGGATGGAAAAGCGTGGAGAAGAAGAGGATTGGTCAGCGTACAGCCCTCAGAGGCAGAAGATGGCATCCCAATGGACCCGTCTGCTTCTTCTCTTGCTTCGATTCTTTTACGTTATCATTTCGATCCGCTGCTTTGCCTCTTAGATCTGTCCCTTGCATTTATTTCTATTCAGCATTTGATCAAGCTTCGTTCTCGTGGTGGGGGCTTGACTTTTCTGAGCTTTGAATCGGCTGGATTTGCTGGAGATGATGCCCCACGTGCTGTGTTTCCCAGCATTGTAGGTCGTCCTCGTCACACTGGTGTGATGGTTGGCATGGGCCAAAAGGATGCATATGTTGGTGATGAGGCACAATCTAAGAGGGGTATTCTGACTCTCAAGTACCCAATTGAGCATGGAATTGTTAGCAACTGGGATGATATGGAAAAGATTTGGCATCATACCTTCTATAATGAGCTTCGTGTTGCCCCAGAAGAGCACCCAGTTCTTTTAACTGAGGCTCCACTTAATCCCAAGGCTAACCGTGAGAAGATGACTCAAATTATGTTTGAGACTTTTAACACCCCTGCTATGTATGTAGCCATTCAAGCTGTTCTTTCACTGTATGCTAGTGGTCGTACAACTGGTATTGTGTTGGACTCTGGTGATGGTGTCAGCCACACAGTTCCTATCTATGAGGGTTATGCTCTCCCTCATGCCATCCTTCGTCTTGACCTGGCTGGTCGTGACCTCACTGAATACATGATGAAAATTCTGACTGAACGTGGGTATTCTTTTACCACCTCAGCAGAGCGGGAAATTGTTAGAGATGTGAAGGAAAAGCTAGCTTACATTGCCCTTGACTATGAGCTAGAGCTAGAGACATCCAAGACCAGCTCTGCAGTGGAGAAGAGCTATGAGTTGCCTGATGGTCAGGTTATCACTATTGGTGCTGAACGTTTCAGATGTCCAGAGGTTTTGTACCAACCATCTTTTATTGGAATGGAAGCAGCAGGCATTCATGAGACAACATACAACTCCATTATGAAGTGTGACGTCGATATTAGGAAAGACTTGTATGGTAACATCGTCCTCTCAGGAGGTTCAACCATGTTCCCTGGCATTGCTGATAGAATGAGCAAGGAGATCTCTGCGTTAGCCCCAAGTAGCATGAAGATCAAGGTCGTTGCACCACCTGAGAGAAAGTACAGTGTCTGGATTGGGGGTTCAATTTTGGCATCTCTGAGCACCTTCCAGCAGGTTTGTACTATTCTATCCTTCCCTGTTTCTCTGGATATTGTTTTTAAGGGTTTCCATTTGATCTCTGATGAGATGTTTTATTGTCTATTGAGAGCAGATGTGGATTGCAAAGGCAGAGAAGAATTGCAGCTTGCAGCCTATTCAATTTGTTGTCCTTTCATGTTATGTCGGAATGATGACTGA 1434 0.4526 MTGKPDGKAWRRRGLVSVQPSEAEDGIPMDPSASSLASILLRYHFDPLLCLLDLSLAFISIQHLIKLRSRGGGLTFLSFESAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYMMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYELELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLYQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVCTILSFPVSLDIVFKGFHLISDEMFYCLLRADVDCKGREELQLAAYSICCPFMLCRNDD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2355 477 ProSitePatterns Actins and actin-related proteins signature. 167 179 IPR020902 -
Lele08g2355 477 Pfam Actin 82 419 IPR004000 -
Lele08g2355 477 Gene3D Actin; Chain A, domain 4 243 334 - -
Lele08g2355 477 FunFam Major actin 321 401 - -
Lele08g2355 477 SUPERFAMILY Actin-like ATPase domain 210 419 IPR043129 -
Lele08g2355 477 SMART actin_3 82 436 IPR004000 -
Lele08g2355 477 Gene3D - 201 401 - -
Lele08g2355 477 Gene3D - 82 419 - -
Lele08g2355 477 PANTHER ACTIN 82 420 IPR004000 -
Lele08g2355 477 SUPERFAMILY Actin-like ATPase domain 82 216 IPR043129 -
Lele08g2355 477 CDD NBD_sugar-kinase_HSP70_actin 137 244 - -
Lele08g2355 477 FunFam Actin, muscle 243 334 - -
Lele08g2355 477 FunFam Actin, alpha skeletal muscle 71 224 - -
Lele08g2355 477 PRINTS Actin signature 299 315 IPR004000 -
Lele08g2355 477 PRINTS Actin signature 178 191 IPR004000 -
Lele08g2355 477 PRINTS Actin signature 89 98 IPR004000 -
Lele08g2355 477 PRINTS Actin signature 203 222 IPR004000 -
Lele08g2355 477 PRINTS Actin signature 112 123 IPR004000 -
Lele08g2355 477 PRINTS Actin signature 124 146 IPR004000 -
Lele08g2355 477 ProSitePatterns Actins signature 1. 116 126 IPR004001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2355 Lele-ChrLele08 29225171 29228242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2355 82 418 Cytoskeleton Gene Families AT3G12110 95.846 0.0 674