Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2333 ATGATGTTGTCTTCTGGAGGAGAAAATGATAATACGACGTCGTGTTTTCGTCTGGTTGAGCGTAAGGATCCACCACGTGCCGCCACCGGGACGGTATTGCCGACCCTTGGACAGTTTTTGAATTATTACGGTGACGTACGGAAGGAAGAATCAGGTGATGGTGGCGATACGCCGGTGCATCACCACACGCTTGATATGACCGACTTTGGACTCGAGCCGCGCTCCGTACCATTCGTGCTCTCGTTTGATAATCTCACTTACAGTGTGAAGGTTCGCCGGAAAATGAGCTTCTCAATGCTTTATCCGAAGTTGAAGGCAACAGCGGCCACTACTGCTGACGATGGAACTAAGACTCTGCTGAATGATATCTCCGGCGAGGCACGCGACGGAGAGATACTAGCCGTTATGGGAGCTAGTGGGTCAGGGAAATCAACTCTAATCGACGCCTTGGCCAACCGAATCGCTAAGGGAAGCTTGAAAGGAAAAGTGGCGTTGAACGGCGAGGCTTTAGAATCACGGCTTCTGAAAGTGATATCAGCTTATGTAATGCAAGATGATCTTCTCTTTCCGATGCTTACAGTGGAAGAAACTCTGACTTTCGCCGCCGATTTCCGATTACCTCGTACGCTCTCAAGATCCAAGAAGAAGATGCGAGTACAAGCTCTCATCGACCAGCTCGGTCTCAGAAACGCCGCGAAAACCGTTATCGGAGATGAAGGACACCGTGGAGTTTCCGGAGGCGAACGACGCCGTGTTTCCATCGGCATTGACATAATCCACGACCCAATCATCTTGTTCCTCGACGAGCCAACCTCAGGGCTCGATTCAACAAGCGCATACATGGTGGTTAAGGTTTTACAGAGAATCGCCCACACCGGAAGCATCGTGATCATGTCCGTACACCAACCCAGCTCAAGAATCCTGGGACTCCTTGATAGAATGATCTTCTTGTCTCGTGGACAAACAGTGTTCAGTGGCTCACCATTGCAACTTCCAATCTTCTTCTCTGAATTCGGCCACCCAATACCTGAAAACGAGAACCGAACAGAATTCGCACTTGACCTTATTCGCGAGCTCGACTCTTCACCTGGTGGAACAAAAAGCCTGGTCGAGTTCAACAAATCGTGGCAGAGCATCATGAATCATCCAGGAATCCGACCCGATAAGATTAATCAGAACGATTTATCTCTGAAAGAAGCCATTACTGCGAGCATTTCAAGAGGAAAACTAGTGTCAGGTGCGACGGCAACGACGAGGACAAACACCAACAACAACAATGTAAGTCCAACTTCGATGGTTCCAACGTTTGCGAATCCATTCTGGGTTGAAATGTTAAAACTCTCGAAAAGATCATTTACGAATTCTCGTAGAATGCCGGAGCTTTTTGGGATTCGATTGGCTGCGATTTTAGTAACTGGGTTTATTCTCGCCACCATGTTCTGGCAATTAGATAACTCTCCAAAAGGGGTTCAAGAAAGACTCGGCTTTTTCGCTTTCGCCATGTCCACCACCTTCTACACCACCGCCGACGCACTTCCGGTTTTCCTCCAAGAACGATACATTTTCATGAGAGAAACCGCTCACAACGCTTACCGGCGATCATCATACCTCATATCTCACGCTCTGGTATCACTCCCTACATTGCTTATCCTCTCATTAGCTTTCGCCGCCACGACGTTTTGGGCCGTCGGGCTCGACGGAGGATTACCAGGTTTCTTCTTCTACTTCCTAGTCATCTTCGCTTCATTCTGGGCCGGAAACTCCTTCGTCACCTTCCTCTCCGGCGTAGTACCACACGTGATGTTAGGCTACACAATAGTGGTAGCAATCTTAGCATATTTCTTACTGTTCAGTGGATTCTTCATAAACAGAGACAGAATCCCAAGTTACTGGATTTGGTTTCATTACTTATCTCTGGTGAAGTATCCATATGAAGCTGTTCTTCAGAACGAGTTTGATGATCGAGTGAAGTGTTTCGTAAGAGGGGTTCAGATTTTTGATAATACACCACTTGGGGTTGTTCCTGGTTCAACAAAATTGAAACTTTTGGAGGGTTTGAGTAATACTTTGGGCATGAACATAACGAGTTCAACGTGCTTGACGACTGGTTATGATATTTTGCAGCAAAATGGGATAACTCAGTTGAGTAAGTGGAATTGCTTGTGGGTGACGGTGGCATGGGGATTCTTGTTTAGGACTCTGTTTTATTTCTCTTTGTTGTTGGGAAGTAAGAACAAGAGAAGGTGA 2247 0.4704 MMLSSGGENDNTTSCFRLVERKDPPRAATGTVLPTLGQFLNYYGDVRKEESGDGGDTPVHHHTLDMTDFGLEPRSVPFVLSFDNLTYSVKVRRKMSFSMLYPKLKATAATTADDGTKTLLNDISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGKVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAADFRLPRTLSRSKKKMRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAHTGSIVIMSVHQPSSRILGLLDRMIFLSRGQTVFSGSPLQLPIFFSEFGHPIPENENRTEFALDLIRELDSSPGGTKSLVEFNKSWQSIMNHPGIRPDKINQNDLSLKEAITASISRGKLVSGATATTRTNTNNNNVSPTSMVPTFANPFWVEMLKLSKRSFTNSRRMPELFGIRLAAILVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAHNAYRRSSYLISHALVSLPTLLILSLAFAATTFWAVGLDGGLPGFFFYFLVIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDRVKCFVRGVQIFDNTPLGVVPGSTKLKLLEGLSNTLGMNITSSTCLTTGYDILQQNGITQLSKWNCLWVTVAWGFLFRTLFYFSLLLGSKNKRR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2333 748 Pfam ABC transporter 120 272 IPR003439 GO:0005524
Lele08g2333 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 331 IPR027417 -
Lele08g2333 748 SMART AAA_5 129 321 IPR003593 -
Lele08g2333 748 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 104 344 IPR003439 GO:0005524
Lele08g2333 748 Pfam ABC-2 type transporter 447 652 IPR013525 GO:0016020|GO:0140359
Lele08g2333 748 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 63 735 - -
Lele08g2333 748 FunFam ABC transporter G family member 6 109 335 - -
Lele08g2333 748 Gene3D - 104 333 IPR027417 -
Lele08g2333 748 ProSitePatterns ABC transporters family signature. 244 258 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2333 Lele-ChrLele08 29059538 29061784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2333 119 305 Calmodulin-binding Proteins AT2G36910 30.000 4.64e-12 67.8