Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2330 ATGGGTTCTTCCGGTTGCAACTATAAATCTTTTATTGGAGTTTTATCCATTTTCTGGTTAATCTGGGTTTCGTTAGGAGGTGTTTCTGGGGATGACTTTCTCATAGACTGTGGATCCCCCAACATCACTAAACTGGGAACACGTGTATTTCTATCTGATAATTCTACTTCTGGGTTTCTTTCAACCTCAAAAATTATTTTGGCAAAGGCAAATTCCACCACTGTTCTTCCATCATCTTTTGATTCAAACCTGTATCATACTGCTAGAATCCTTGAAGGTGTTTCTCAGTACACATTCCCAATCAAAAAACATGGTAGGCACTGGATTCGCTTGTACTTCTTCCCTTTTAGTTTTGGAAACTACAACATGAGCTCTGCAAAATTCTCTGTTTCTGCTCAAGGAAGAACCACCCTGCTCAAAGATTTTCAGTTAGATAGTGGTTTTGTACGGAGGGAATACTCTTTGAACATCTCTGAGAGCCAGTTTGTACTCACTTTCACGCCTTCTTCTAAGTCATTTGCATTCATAAATGCCTTAGAAGTTATCTCAATTCCTGATAATGTTATTCCAGAGCATGTCAAGAGTGTTCATCCACAAGGTGATGATAAGAATCTATGGAAGCAGGCTTTGGAAACCGTTGCTAGGGTGGACATGGGAAATCAATCTGTGTCACCTCTAAATGATAGCTTGGGGCGTGATTGGGTGGCAGATGGTTCGTTTCTTATTCACTCGAATTTCGCCAATTTCACATCCAACATTACAGCAGTGAATTTCAAAGCAGCAAACATGTCAGATGTTATTGCACCAGCTGAGGTATATGGTACTTTGACTACATTGAATGTTGCTGATCTAGATCCCAGATCCAGAGCAAATATCACATGGGTTTTTAATGTTGATCCTGGTTTTGATTATCTGCTTCGGTTTCACTTCTGTAACATTGAGAATCTACCACCAGACACTCTCTTTAATGCTTATGTTAATTCATGGTTTGTTTCTACTATCAATATTGGCACGGCAATGCCACATCGAGGAGCCCCATATTATACGGATGCAATCACAAAAGTAAGTGGTAGCCCTGATTTACTTGTAACCGTTGGTGTACCTAATCTAGGTGATAATGTTTCTCCAGTCTTTCTCAATGGGCTTGAGATCATGAAAATGAGCAATTCAAAAGATAGCCTGGTCTTGGACTTTAAGAGCAGTTCCAAGAAAAAACTTGGTTTTATAGTAGCAGGTTGTGTGGCTGGTTTGGTTGTGATTGTTTTAGTTGTGTCTATGGCTGTGTTACTATACCGAAGAAGAAGAAACCGTCTCCATGTTAGTCATGGAAATGGGAAGGACCTTTCCGGTATGAGTGGGATGGATCATTCTAACATCTTTTCCAACTCGAAAATCGGGTATCGTTTCCCACTTGCAGTCATCCAAGAGGCAACTAATAATTTCAGTGAAGATTTGGTGGTTGGTGTGGGAGGTTTTGGGAAGGTTTACAAAGGAATGTTCAGAGATGAAACAAAGGTGGCTGTTAAGAGGGGATCATCTCAATCCCAACAAGGTCTTGCAGAGTTCAGAACTGAAATTGAGATGCTATCTCAGTTTCGGCACCGGCATCTGGTATCATTGATCGGATACTGCCACGAGCAAGAAGAGAGAATCATTATATATGAATACATGGAAAATGGTACACTAAAGAACCATTTGTATGGATCAGATGATAAACCAAGCTTGAATTGGAGGCAGAGGTTAGAAGCATGCATAGGAGCTGCCAAAGGGCTTCACTATCTTCACACTGGCTCTAATAAGGCAATTATTCACCGCGATGTTAAATCAGCAAATATACTCCTGGATGAGAATTTCATGGCCAAGGTTGCTGATTTCGGTCTTTCAAAGACGGGACCCGAGATTGATAAGACACATGTCAGCACTGCAGTGAAAGGAAGCTTTGGATATCTTGATCCAGAATACTTAACAACACAGCAACTCACAGAGAAATCCGATGTTTACGCCTTTGGTGTGGTCATGTTTGAAGTCCTCTGTGGTAGACCTGTGATAAACCCATCACTCCCAAGGGAAGAGGTGAATCTGATTGAATGGGTGATGAAATGTCTGGAGAGAAAGAACTTGAAAGAAATCGTGGATGCTCGTATAGCGGATCAGATAGGGTCGGATTCGCTACAAAAGTTTGTAGAGATTGCAGAAAAGTGCTTAGCTGAACATGGCCGTAAAAGGCCGACCATGGGATATGTGTTGTGGAACTTGGAGTATGCCCTAAGACAAGAAGGCGTTGGTTGCGAACCGTTGCAGATTCGTCAAATGAATCGCTCAGATACCGGTTTCTCAGGTACAGAACACACCATGGGAAGCATGGGTGGCATTTCTGATGTCTCAATGAGCAAGGTGTTTGCTCAAATGGTGAGAAGAGAGGATATGAGGTAA 2433 0.4164 MGSSGCNYKSFIGVLSIFWLIWVSLGGVSGDDFLIDCGSPNITKLGTRVFLSDNSTSGFLSTSKIILAKANSTTVLPSSFDSNLYHTARILEGVSQYTFPIKKHGRHWIRLYFFPFSFGNYNMSSAKFSVSAQGRTTLLKDFQLDSGFVRREYSLNISESQFVLTFTPSSKSFAFINALEVISIPDNVIPEHVKSVHPQGDDKNLWKQALETVARVDMGNQSVSPLNDSLGRDWVADGSFLIHSNFANFTSNITAVNFKAANMSDVIAPAEVYGTLTTLNVADLDPRSRANITWVFNVDPGFDYLLRFHFCNIENLPPDTLFNAYVNSWFVSTINIGTAMPHRGAPYYTDAITKVSGSPDLLVTVGVPNLGDNVSPVFLNGLEIMKMSNSKDSLVLDFKSSSKKKLGFIVAGCVAGLVVIVLVVSMAVLLYRRRRNRLHVSHGNGKDLSGMSGMDHSNIFSNSKIGYRFPLAVIQEATNNFSEDLVVGVGGFGKVYKGMFRDETKVAVKRGSSQSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCHEQEERIIIYEYMENGTLKNHLYGSDDKPSLNWRQRLEACIGAAKGLHYLHTGSNKAIIHRDVKSANILLDENFMAKVADFGLSKTGPEIDKTHVSTAVKGSFGYLDPEYLTTQQLTEKSDVYAFGVVMFEVLCGRPVINPSLPREEVNLIEWVMKCLERKNLKEIVDARIADQIGSDSLQKFVEIAEKCLAEHGRKRPTMGYVLWNLEYALRQEGVGCEPLQIRQMNRSDTGFSGTEHTMGSMGGISDVSMSKVFAQMVRREDMR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2330 810 PANTHER OS07G0166700 PROTEIN 468 758 IPR045272 GO:0004714|GO:0006468
Lele08g2330 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Lele08g2330 810 SUPERFAMILY Protein kinase-like (PK-like) 455 753 IPR011009 -
Lele08g2330 810 Pfam Protein tyrosine and serine/threonine kinase 486 748 IPR001245 GO:0004672|GO:0006468
Lele08g2330 810 ProSiteProfiles Protein kinase domain profile. 481 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2330 810 FunFam Receptor-like protein kinase FERONIA 557 771 - -
Lele08g2330 810 SMART serkin_6 481 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2330 810 FunFam Putative receptor-like protein kinase 32 185 - -
Lele08g2330 810 ProSitePatterns Protein kinases ATP-binding region signature. 487 509 IPR017441 GO:0005524
Lele08g2330 810 Gene3D Phosphorylase Kinase; domain 1 447 556 - -
Lele08g2330 810 FunFam receptor-like protein kinase FERONIA 447 556 - -
Lele08g2330 810 CDD STKc_IRAK 496 753 - -
Lele08g2330 810 Pfam Malectin-like domain 35 387 IPR024788 -
Lele08g2330 810 Gene3D Transferase(Phosphotransferase) domain 1 557 765 - -
Lele08g2330 810 Gene3D - 33 184 - -
Lele08g2330 810 Gene3D - 208 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2330 Lele-ChrLele08 29035843 29038275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2330 8 807 Receptor kinase-like Gene Family AT3G46290 51.254 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele08g2330 Malectin_like 1.7e-27 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2412 05 39864063 39866495 Lele08g2330 08 29035843 29038275 hybridization
Lele06g2391 06 31666453 31669724 Lele08g2330 08 29035843 29038275 hybridization