Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2319 ATGATAAGTTTGGCAGTACACAGAAACCTCCTCAAGCTCTATGGTTTCTGTATGACTCCCACTGAAAGGCTTCTGTTTTACCCTTTTATGCCTAATGGCAGCGTTGCTTCTCGCCTCAAAGCAAAACCAGTGTTGGATTGGGAAACAAGGAAGCAGATAGAATTAGGAGCAGCAAGGGGATTGTTATACCTTCATGAGCAGTGTGATCCAAAGATAATTAATAGGGATGTGAAAGCAGCAAACATACTTCTTGATGAGTACTATGAAGCAGTGGATGGAGATTTTGGATTGGCAAAAGAAAACTTGATGCCTTTCGATTTGGTAAGCCTTAGGGCACTTGACTTTGGAAAAGCTTTCAATCAGAAAGGAGACATGCTTGATTGGGTGAAGAAAATCCATCAAGAGAAGAAACTAGAACTGCTAGTGGACAAGGATTTGAAGAGCAACTATGACAGAATAGAGCTAGAAGAAACGGTGAAAATGGCACTTCTGAGTACACAATATGTTCCAGGACAATGTCAGAAGTAG 528 0.411 MISLAVHRNLLKLYGFCMTPTERLLFYPFMPNGSVASRLKAKPVLDWETRKQIELGAARGLLYLHEQCDPKIINRDVKAANILLDEYYEAVDGDFGLAKENLMPFDLVSLRALDFGKAFNQKGDMLDWVKKIHQEKKLELLVDKDLKSNYDRIELEETVKMALLSTQYVPGQCQK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2319 175 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 171 - -
Lele08g2319 175 SUPERFAMILY Protein kinase-like (PK-like) 6 105 IPR011009 -
Lele08g2319 175 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2319 175 SMART serkin_6 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2319 175 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Lele08g2319 175 Pfam Protein kinase domain 5 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2319 Lele-ChrLele08 28920641 28923573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2319 1 172 Receptor kinase-like Gene Family AT5G16000 61.033 2.19e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele08g2319 Pkinase 1.7e-14 CL0016