Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2314 ATGGGTCACTCCAATGTGTGGAATTCTCACCCTAAGAACTACGGTCCTGGTTCTCGCACCTGCCGGGTGTGTGGTAACCCTCATGGGTTGATTAGGAAGTATGGGCTTATGTGTTGCCGTCAGTGCTTCCGAAGCAACGCCAAGGAAATTGGCTTCATCAAGGTGAAAAGAATAGTCTTGCATTACTTGCCATATATTGTTTTAAAATCATAA 213 0.4507 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKRIVLHYLPYIVLKS 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2314 70 FunFam 40S ribosomal protein S29 1 56 - -
Lele08g2314 70 Pfam Ribosomal protein S14p/S29e 7 54 IPR001209 GO:0003735|GO:0005840|GO:0006412
Lele08g2314 70 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 14 49 - -
Lele08g2314 70 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Lele08g2314 70 PANTHER 40S RIBOSOMAL PROTEIN S29 1 55 IPR039744 GO:0003735|GO:0008270
Lele08g2314 70 Hamap 30S ribosomal protein S14 type Z [rpsZ]. 2 57 IPR023676 GO:0003723|GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2314 Lele-ChrLele08 28870205 28871239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2314 1 56 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 89.286 2.94e-33 106