Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2304 ATGGCTTCTCCAAATTCTTCCCCTTCTGCTGTTCCTCCCACTTCTGCTGATAAATCCCCATCAAATTCTCTCATATCATCACAGCCTCCCACTTCTTCTACCCCAAGTCAAACATCTAATACCCCTGCTCCTTCATCTCCTTCTGTCACTGCAAACCCACCTCCTTCCCCATCTCTTTCTCCTCCACCAGCTACACCACCGCCAACCTCTTCCCCACCTCCAGCATTGCCACCACCAGCTTCACCCTCACCTGAAGCATTGACGCCACCGGCTTCGCCCCCACCTGAAGCATTGACGCCACCGGCTTCGCCCCCACCTGAAGCATTGACGCCACCTGCTTCGCCCCCGCCTCCGGCATTGCCACCACCATCTTTACCATCTACACCAAACTCTCCTCCACCAACAACACCTTCAGCATTACCACCAGCATCTGCTTCCACCCCTCCTCCAGCTGAGAAGTCACCCGCCGCTCCAAATTTATCCCCACCACCTCCAGTAGAAGGTTCTCCTCCTCCACAGGCCTCAAAGGAACCTCCTGCAGCAGATCCGCCTCCCTCTCGACATAATTCACCTTCTCCTCCTCCTCCTCCTCCAAAGAATGTCCCAAAATCACCATCGTCCAGCTCCCCTCCTCCAACTCTGGTAAAGCCGCCAGAAAGTGCTCCTGTGCTTAAACCCCCACCATCTGTTTCCGAATCTCCTCCTTCTCCTGCTGCAGATGATCCCCCTCAATCCGCAACACCATCACATTCTCCTCCTTCAGTTCCAACTTCCTCTTCGTCTCCACCAACTGTTTCACCTTCTCCTCCAACTAATTCATCAGCAGCAGGGGGCCCAATTGCAGCCCTACCATCTATTCCAACAGAGAAACCAACTGCAAAATCAACTGATGATGCTAGTGTAACTGCAAATGCCCCGCCTATGCATACACAGGGGTTAAGTGCAGGAGGAGGTGTGGCTATTGGTGTCATAGTTGGTTTTGTTGTCCTCAGTCTTCTTGTTATGGCTGTGTGGTTTGTAAAGCGAAAGAGAAAGCAAACAGGATCAAAAGTTGGTTATGCTATGACCTCTCCATTTGGCTCATCTCAGAATTCAGGTACCATATTCTTGAGGCCACAGTCTCCATCTCCCTATTATGGTAGTAACCCTGGTAGTGGTCTCATGTATTCTCCATCAGAGCCTGGTGGAGTAAGTCAGTCAAGATCATCATTCATGTATGAAGAACTTGTGCAAGCAACCAATGGGTTTTCAGCACAAAACCTTTTGGGTGAAGGTGGATTTGGTTGTGTCTTCAAAGGTTTGCTCCATGATGGAAGAGAAGTCGCCGTGAAGCAGCTCAAAATTGGTGGCGGGCAAGGCGAACGTGAGTTTCAAGCAGAAGTGGAGATTATTAGCCGTGTACATCACCGCCATCTGGTTTCCTTGGAGGGTTACTGTATATCACAGCATCAAAGATTGCTTGTCTATGACTATTTGCCCAACAATACCCTTCATTACCATCTTCATGGTGAAGACAGGCCAGTTTTGGACTGGGCTACCAGAGTCAAGATTGCTGCTGGTTCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGTATTATTCACCGAGACATCAAGTCATCAAACATCCTTCTTGACAACAACTTTGAAGCTAGAGTTTCAGATTTTGGGCTTGCAAAATTAGCCTTGGATTCTAACACCCATGTAACTACTCGCGTAATGGGAACCTTTGGGTACATGGCCCCAGAGTATGCAACAAGTGGGAAGTTGACTGAAAAATCTGATGTTTATTCTTTTGGCGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCTTCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGGCCTTTGCTAACTGAAGTACTTGATAACGAAGACTTTGAAATATTGGCGGATCTAAAGTTAGAGAAGAACTACAATAGAAATGAAATGTTCCGGATGATCGAGGCAGCTGCAGCCTGTGTGCGTCACTCTGCAGCGAAGAGGCCCCGAATGAGTCAGGTTGTGAGAGCTTTAGATCTGATGGATGAACTAGCAGATCTGAATAATGGAATGAAACCTGGGCAGAGCTCAGTGTTTGATTCTGCAGAGCAAAATGAACAAATCAGAATGTTCAGGAGGCTGGCTTTCGGAAGCCAGGATTACAGTAGCAGTTATTTCAATGACTCTCATAGTAGCTGGAGAAGTAGAGATCAAGGCCACCACACCACTACTTCCTTCTCCCAAAATAGGTCCGGACCATGGAACGTGTAA 2304 0.4848 MASPNSSPSAVPPTSADKSPSNSLISSQPPTSSTPSQTSNTPAPSSPSVTANPPPSPSLSPPPATPPPTSSPPPALPPPASPSPEALTPPASPPPEALTPPASPPPEALTPPASPPPPALPPPSLPSTPNSPPPTTPSALPPASASTPPPAEKSPAAPNLSPPPPVEGSPPPQASKEPPAADPPPSRHNSPSPPPPPPKNVPKSPSSSSPPPTLVKPPESAPVLKPPPSVSESPPSPAADDPPQSATPSHSPPSVPTSSSSPPTVSPSPPTNSSAAGGPIAALPSIPTEKPTAKSTDDASVTANAPPMHTQGLSAGGGVAIGVIVGFVVLSLLVMAVWFVKRKRKQTGSKVGYAMTSPFGSSQNSGTIFLRPQSPSPYYGSNPGSGLMYSPSEPGGVSQSRSSFMYEELVQATNGFSAQNLLGEGGFGCVFKGLLHDGREVAVKQLKIGGGQGEREFQAEVEIISRVHHRHLVSLEGYCISQHQRLLVYDYLPNNTLHYHLHGEDRPVLDWATRVKIAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEARVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEVLDNEDFEILADLKLEKNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVVRALDLMDELADLNNGMKPGQSSVFDSAEQNEQIRMFRRLAFGSQDYSSSYFNDSHSSWRSRDQGHHTTTSFSQNRSGPWNV 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2304 767 SUPERFAMILY Protein kinase-like (PK-like) 394 690 IPR011009 -
Lele08g2304 767 Pfam Protein tyrosine and serine/threonine kinase 419 689 IPR001245 GO:0004672|GO:0006468
Lele08g2304 767 Gene3D Phosphorylase Kinase; domain 1 391 491 - -
Lele08g2304 767 SMART serkin_6 416 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2304 767 MobiDBLite consensus disorder prediction 47 269 - -
Lele08g2304 767 Gene3D Transferase(Phosphotransferase) domain 1 492 708 - -
Lele08g2304 767 MobiDBLite consensus disorder prediction 1 46 - -
Lele08g2304 767 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 327 731 - -
Lele08g2304 767 CDD STKc_IRAK 422 692 - -
Lele08g2304 767 MobiDBLite consensus disorder prediction 1 305 - -
Lele08g2304 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Lele08g2304 767 FunFam Proline-rich receptor-like protein kinase PERK8 388 491 - -
Lele08g2304 767 MobiDBLite consensus disorder prediction 743 767 - -
Lele08g2304 767 ProSiteProfiles Protein kinase domain profile. 416 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2304 767 MobiDBLite consensus disorder prediction 289 305 - -
Lele08g2304 767 ProSitePatterns Protein kinases ATP-binding region signature. 422 444 IPR017441 GO:0005524
Lele08g2304 767 FunFam proline-rich receptor-like protein kinase PERK8 492 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2304 Lele-ChrLele08 28698803 28704602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2304 289 749 Trihelix Transcription Factor Family AT5G38560 68.710 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele08g2304 PK_Tyr_Ser-Thr 2.3e-47 CL0016