Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2281 ATGGTCAATTTCAGGATCGGGGGCTCCAGAAAATCTGGTTGCGGTGAAGGAACTGATTTAGTTGCCATTGGGGTCTCTGTTGGTTTGGCCTGTGGAATTTTAATAGCTTGTCTCATATGTTTGGTCATAAAGCGGTATAAGAGGCATGCTCATCTTAGACGTTGTGCAAATGAGCGTAGTCTAACAACACTTCCTATACGCACAAATGGATTAGAAACAAGCACTGACTTCAGTGCTTCTCTTACAAGCTCCATAGGTGCTCCAATGTCAGAAAATCTTCAAAAAGATTCCCATTTCTCTTGGTGGAAACGTTCAAAGAAAGATCAGTTTGCGTCCTCATCAGGCATTCTTAGATACTCATTCAAAGAAATTCAGAAGGCAACACAAAATTTCACAACTATCTTGGGAGAAGGATCATTTGGCACAGTTCACAAAGCAACAATGCCTACTGGCGAGGTAGTAGCTGTGAAGGTGCTTGGTTCTGATTCCAAACAAGGGGAGAAAGAATTCCAAGCAGAGGTACTTTTGCTAGGAAGACTGCATCATCGGAATCTTGTAAATTTGTTAGGATATTCTGTAGATAAAGGACAACGTATTTTGATTTACGAGTTCATGAGCAATGGAAGTCTGGAAAGGCTTATACATGGTGAAGAAAAGGTTTTAAGTTGGGATGAAAGGCTGCAAATTTCTGTTGATATTTCACATGGAATTGAATACCTTCATGAAGGAGCAGTCCCACCCGTCATACACCGTGATTTGAAAGCTGCCAATATATTGTTAGATCACTCAATGAGAGCTAAGGTGGCTGATTTTGGGCTCTCAAAGGAGGAAATCTTTGATGGGCGAAATTCTGGCTTGAAAGGCACATATGGCTACATAGACCCATCATACATTTCCACTAACAAGTTCACAATGAAAAGTGACATTTACAGTTTCGGTATCATCATTTTTGAGCTCATCACTGCCATTCATCCTCAACAGAATTTGATGGAATACATTAACCTTGCTGCAATAGATCATGATGGTGTAGATGGAATACTTGACAAGAACCTGGTGGGAAAATGCAACATTGAAGAAGTGAGGAAGCTTGCAAAGATTGGACACAAGTGCTTGCACAAATCATCCAGGAAACGTCCTTCAATTGGTGAGGTTTCACAAGCTATATCCAGCATAAGACAGACACGACGCCTTTTAAAAGAAAACACCATGTCATTTGCTGCCTCTAGCTTTTCCAGAGCTCTGAGCCGACTAGAGGATCAACAGGTTGAGTTAAGCAGGATAGCCACCATGGCCCACTAG 1299 0.4149 MVNFRIGGSRKSGCGEGTDLVAIGVSVGLACGILIACLICLVIKRYKRHAHLRRCANERSLTTLPIRTNGLETSTDFSASLTSSIGAPMSENLQKDSHFSWWKRSKKDQFASSSGILRYSFKEIQKATQNFTTILGEGSFGTVHKATMPTGEVVAVKVLGSDSKQGEKEFQAEVLLLGRLHHRNLVNLLGYSVDKGQRILIYEFMSNGSLERLIHGEEKVLSWDERLQISVDISHGIEYLHEGAVPPVIHRDLKAANILLDHSMRAKVADFGLSKEEIFDGRNSGLKGTYGYIDPSYISTNKFTMKSDIYSFGIIIFELITAIHPQQNLMEYINLAAIDHDGVDGILDKNLVGKCNIEEVRKLAKIGHKCLHKSSRKRPSIGEVSQAISSIRQTRRLLKENTMSFAASSFSRALSRLEDQQVELSRIATMAH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2281 432 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Lele08g2281 432 Gene3D Phosphorylase Kinase; domain 1 93 204 - -
Lele08g2281 432 SMART serkin_6 129 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2281 432 Gene3D Transferase(Phosphotransferase) domain 1 205 412 - -
Lele08g2281 432 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 205 413 - -
Lele08g2281 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Lele08g2281 432 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 399 - -
Lele08g2281 432 FunFam serine/threonine-protein kinase PBS1-like 100 204 - -
Lele08g2281 432 Pfam Protein tyrosine and serine/threonine kinase 131 386 IPR001245 GO:0004672|GO:0006468
Lele08g2281 432 SUPERFAMILY Protein kinase-like (PK-like) 103 386 IPR011009 -
Lele08g2281 432 ProSiteProfiles Protein kinase domain profile. 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2281 432 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2281 Lele-ChrLele08 28441168 28446889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2281 120 393 Receptor kinase-like Gene Family AT4G02010 41.638 5.87e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lele08g2281 PK_Tyr_Ser-Thr 7.4e-47 CL0016