Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2279 ATGCGGCGATATGGGAGATTCACATTTTCCATACCCTTTTCCTTTCTGAATGCAGCATATGCATTGACCTTTGTGAATATAGAGAATTCACATCCGGAGGATTCACGTGAAGTGGTTCTGAAACTTCGCAATTGTCACATCTGAACACCAAAAATATACTGTCCATGCTCAGATGGAAACCAGTGCGCAGCCAACCAAACCCTTCGTGCAGGGCGTACATTAGCAACCGCCACTTCTCACAATCGACAAATTACATCACCAACCCATCGTCACTTTAGGGCCTCCTTCCCTGATTCTGTCCAATTCCAACTGTACATAAAACAAAATTCGACCCGTCAACCGTCGGAGCCCCATTGCCGGCGAAATCTCCTCCCAAATTCTCCTCCTTCTCCATTTGCTTCCACACTCTCCCTCTCCCTGAATCTTGATTTTCTCGCGACAAGTATTTGGTTTCCAATCATTTCTCTGTCGTGTGGAGCGGAGGATATGGCTCGGTCTGCGAGAGGTCAGCAAGAAGAATTGGAAGACGACGACGAAGATCACCTGACTGGAAATGGCTCTTCTTCACACAAAGTGAAGGTGGATGAAGCGACTAGAGAGCAGCGGGTTAACGCGCATCGTTCTAAGCATTCAGAAACTGAGCAGCGTAGAAGGAGCAAGATAAATGAAAGATTTCAGATTCTGAGAGATCTCATTCCTCAAAAGGATCAAAAAAGGGATAAGGCTTCTTTCTTGTTGGAGGTTATTGAGTATATTCAATTTTTACATGAGAAATTACAAACATATGACCAATCTTACCAAGGGTGGAATCAGGAGCCAATGAAATTAATTCCTTGGAGAAATCATCGTGGACCTACAGATAATGTCACATCTCAGGCTATGCAAAATGGTTCTGGCCATGACAACAATGACATCGTCTATCCATCGCTGCCCTTAAATGCACAGAATACAATTGAATCTGACTTGTCATCAACAATTATCCATAAGGCTAGCACCCCTGGTTTACCTTCTGATGCTGTTCCCTTGGGTATGCAAATGCGGTTGGACATGTTTGATCCGACTGTGAGCAGTGGCATTCCAACCCAACATTTACATGAAGCAATATCTAACACTGAGAACATGCCTTCCCATACTCAGCCTCAGGTGTGTCTTGGCGAACCTAAGGAGGGTGCATATGATTTTCGAAATACTACATTGAAGGAACAGGACAATCTGACATTTGAAAGCGAATCAGTTAGCATCTCAAGAGCCTATTCTCAGGGAATATTGGATACTTTTGTGCAATCATTGCGGTCTACAGGTGTGGATTTATCTGAGGCCAATGTTTCAGTACAAATTGATGTAGGGAGACGATCAATGGCCTCCACATCTAGCTCAAAGGATCATGAGAACCAATTTGTGAACACGCCATCAGTGCCATATTCAGGAGTGGACTACTACAGCGAGGATTCTGAACAAGCTCTTAAGAGGCTTAGAACAGAAGAGAGTTAG 1491 0.4406 MRRYGRFTFSIPFSFLNAAYALTFVNIENSHPEDSREVVLKLRNCHIXTPKIYCPCSDGNQCAANQTLRAGRTLATATSHNRQITSPTHRHFRASFPDSVQFQLYIKQNSTRQPSEPHCRRNLLPNSPPSPFASTLSLSLNLDFLATSIWFPIISLSCGAEDMARSARGQQEELEDDDEDHLTGNGSSSHKVKVDEATREQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQKDQKRDKASFLLEVIEYIQFLHEKLQTYDQSYQGWNQEPMKLIPWRNHRGPTDNVTSQAMQNGSGHDNNDIVYPSLPLNAQNTIESDLSSTIIHKASTPGLPSDAVPLGMQMRLDMFDPTVSSGIPTQHLHEAISNTENMPSHTQPQVCLGEPKEGAYDFRNTTLKEQDNLTFESESVSISRAYSQGILDTFVQSLRSTGVDLSEANVSVQIDVGRRSMASTSSSKDHENQFVNTPSVPYSGVDYYSEDSEQALKRLRTEES 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2279 496 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 161 494 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lele08g2279 496 Coils Coil 481 496 - -
Lele08g2279 496 Pfam Helix-loop-helix DNA-binding domain 207 255 IPR011598 GO:0046983
Lele08g2279 496 SMART finulus 211 261 IPR011598 GO:0046983
Lele08g2279 496 MobiDBLite consensus disorder prediction 455 479 - -
Lele08g2279 496 MobiDBLite consensus disorder prediction 166 218 - -
Lele08g2279 496 MobiDBLite consensus disorder prediction 284 308 - -
Lele08g2279 496 MobiDBLite consensus disorder prediction 181 218 - -
Lele08g2279 496 CDD bHLH_AtBIM_like 204 280 - -
Lele08g2279 496 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 205 255 IPR011598 GO:0046983
Lele08g2279 496 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 206 282 IPR036638 GO:0046983
Lele08g2279 496 Gene3D - 203 276 IPR036638 GO:0046983
Lele08g2279 496 MobiDBLite consensus disorder prediction 455 475 - -
Lele08g2279 496 MobiDBLite consensus disorder prediction 277 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2279 Lele-ChrLele08 28418419 28426481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2279 165 452 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 37.417 1.20e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele08g2279 HLH 7.9e-15 No_clan