Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2266 ATGATCCCGGCGGACAAAGGTCAATTGGATGAATGGTTCTCACAGAACGTGCAGCCATTATCATCCCGGAAGGTAACTCTGGACCCAGCCCTGGTGGCCGCCGAAGCTTGTCCGAAGGTTGTTACGGTGTCGCAGGACGGGGAAGGCGACTTCAAGACGATAACGGACGCCATTAACAGCATGCCGTTGAATAACAATCGGAGAGTGATAATCAAAATCGCGGGTGGAAAGTATACAGAGAAGATCACCATTCCTAGGACAAAGGATTTCATCACTTTAATTGGTGATCCTAAAAACATGCCCAACTTGACTTTCAATGGCGATGCCAAAACATACGGCACTGTTGATAGTGCTACATTCATTACCAACAGCAATTACTTCGTCGCTGCAAATATCATTTTCTCGGTTTAATCAGCATCGATGCCGGATGGACAAAGGGAGGGAGCTCCGGCGGTGGCGATCCGTGTGTCTGGCAACAACTCGGCATTCTACAACCGCAAGATATTAGGGGTTCAGGACACAATGTGTGACGACAGGGGAAACCATTTATTCAAGGACTGCAAGATCCATGGCACATTGGACTTCATATTTGGGAGCGGCAAGTCGCTGTATCTGAACACGAAGATAGTGGTGGAGGGGAACGTGGGAGGCGTGATCGTGGCTCAGGCGAGGGAGACAGACGACGACACCATAGGGTTCTCCTTCGTGCACTGCAAAATAAGTGGCACTGCCAATGGCACGTTCTTGGGAAGAGCTTGGATGGCTTATGGCAAAGTTGTGTATGCTTATACTTCCATGAGCAATATTATTACCCCTCTTGGCTGGAACATTAACAACCATGATTCCATGGCTCAGTACGTATTTCTCTCTTTCTCTTCTCAATATTACATTACACATGCATATTTGATACTTTAG 915 0.4754 MIPADKGQLDEWFSQNVQPLSSRKVTLDPALVAAEACPKVVTVSQDGEGDFKTITDAINSMPLNNNRRVIIKIAGGKYTEKITIPRTKDFITLIGDPKNMPNLTFNGDAKTYGTVDSATFITNSNYFVAANIIFSVXSASMPDGQREGAPAVAIRVSGNNSAFYNRKILGVQDTMCDDRGNHLFKDCKIHGTLDFIFGSGKSLYLNTKIVVEGNVGGVIVAQARETDDDTIGFSFVHCKISGTANGTFLGRAWMAYGKVVYAYTSMSNIITPLGWNINNHDSMAQYVFLSFSSQYYITHAYLIL 304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2266 304 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 284 - -
Lele08g2266 304 SUPERFAMILY Pectin lyase-like 36 285 IPR011050 -
Lele08g2266 304 Pfam Pectinesterase 41 284 IPR000070 GO:0030599|GO:0042545
Lele08g2266 304 Gene3D - 5 295 IPR012334 -
Lele08g2266 304 ProSitePatterns Pectinesterase signature 2. 189 198 IPR033131 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele08g2266 Lele-ChrLele08 28271122 28272999 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2266 2 288 Carbohydrate Esterase AT1G69940 53.659 2.99e-108 317