Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2264 ATGTCGGACGGGCGAAGGGAGGGAGCTCAGGCATTGGCAATCCGTGTGTCTGGCAACAACTCGGCATTCTACAACTGCATCATGTTAGGGTTTCAGGACACGATATGCGACGACAGGCGAAATCATTTATTCAAGGACTGCACAATCCAAGACACGGTGGACTTCATATTTGGGAGCGGCAAGTCGTTGTATCTGAACACGAAATTGGTGGTAGTGGGAAGCGTCGGAGGCGTGATCGTGGCTCAGGCGAGAGAAAGTGACGACGACACCATAGGGTACTCCTTAGTGCACTGCGACATAAGTGGCACTGCCAATGGCACGTTCTTGGGAAGAGCTTGGATGGCTTATGGCAGAGTTGTGTATTCTTATACTTCCATGAGCTACATTATTACCCCTCTTGGCTGGAACATTAACAACCATCCTTCAATGGCTCAGTACGTATTTCTCTCTTTCTCTTTTAAACATTACTGGTGTAAATTCCGGTCCCCGATATAA 495 0.4828 MSDGRREGAQALAIRVSGNNSAFYNCIMLGFQDTICDDRRNHLFKDCTIQDTVDFIFGSGKSLYLNTKLVVVGSVGGVIVAQARESDDDTIGYSLVHCDISGTANGTFLGRAWMAYGRVVYSYTSMSYIITPLGWNINNHPSMAQYVFLSFSFKHYWCKFRSPI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2264 164 Pfam Pectinesterase 8 137 IPR000070 GO:0030599|GO:0042545
Lele08g2264 164 Gene3D - 2 158 IPR012334 -
Lele08g2264 164 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 156 - -
Lele08g2264 164 SUPERFAMILY Pectin lyase-like 7 143 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2264 Lele-ChrLele08 28245236 28245730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2264 2 158 Carbohydrate Esterase AT1G69940 52.229 1.24e-55 177