Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2263 ATGGCCGCCACAAAAGCAACAACAAGCAGCTCCACCATTGTGGTGGCTGCATTCTTGGCAGTTCTCATCGCCGACACCGCCACTACGGTCCTCTGCGACGACATGGCTCCAGTTCCCGGCGACAAGTCCCAACTTACGAAATGGTTCAACGACAACGTGAAGCCATTGTCGTCGCAGCTTCGAGTGAATAATAACAAGAAGGGCGTAAGAATTAACCCTAAACTTGCAGCTGCAGAGAAACAAGTGAAGGTGGTGAAGGTGAAGAAAGATGGAAGCGGAGACTTCAAGACGGTGACGGAGGCCATTAAAAGCATACCTGACGGTAACCAGAGGAGAGTGATCGTGTATATTGGGAGTGGGACTTACTTTGAGAAGATAAACATAGGGAAGACGAAGCCATTTGTGACTCTGCTTGGTGATCCTAAGAATTTTCCAAACTTGACCTTCGATGGAACTGCACACAAATATGGAACTGTGGATAGTGCTTCCTTGATTGTTGAATCAGATTACTTCGTTGCCGTCAATCTCATTATTTCGAATAAGGCACCAATGCCGGATGGGAAGATGGCAGGGGCTCAGGCAGTGGCGTTGAGGATTTCCGGCAACTACGCGGCGTTCCACCATTGCACATTGTTGGGATTTCAAGACACCATTTGTGATGACAGGGGGAACCATTTTTTCAAAGATTGCTACGTTCAGGGCACCATGGATTTCATATTTGGAAGTGGAAAATCTCTTTATCTGAACACAAAATTGGTGGTGGTTGGGAAGACGGGAGGGGTGATAGCAGCGCCAGCAAGGAAGAACCAGTTGGACGACACGTGTGGATATTCGTTTGTGCATTGTGAGATAAGGGGGACAGGGAAGGGCACGCACCTGGCGAGAGCGTGGATGTCACATCCCAAAGTGGTATACGCTTACACCTCCATGAGCTCAATTATCCACCCCCTTGGTTGGCAAGATGGGCCTCAAGGCTCTCCCAAGACGGTGTATTATGGAGAGTACAAGAACAAAGGAGTCGGAGCAAGCAGGAGAGGAAGAGCCAACTTCACAAAGTGGCTCAGTGACTCAGAGGCCTTACCTTTCATCACTCTTGCCTACATTCAAGCCTCCCACTGGTTGCTTCCTCCCCCAACACTCCACTAG 1146 0.493 MAATKATTSSSTIVVAAFLAVLIADTATTVLCDDMAPVPGDKSQLTKWFNDNVKPLSSQLRVNNNKKGVRINPKLAAAEKQVKVVKVKKDGSGDFKTVTEAIKSIPDGNQRRVIVYIGSGTYFEKINIGKTKPFVTLLGDPKNFPNLTFDGTAHKYGTVDSASLIVESDYFVAVNLIISNKAPMPDGKMAGAQAVALRISGNYAAFHHCTLLGFQDTICDDRGNHFFKDCYVQGTMDFIFGSGKSLYLNTKLVVVGKTGGVIAAPARKNQLDDTCGYSFVHCEIRGTGKGTHLARAWMSHPKVVYAYTSMSSIIHPLGWQDGPQGSPKTVYYGEYKNKGVGASRRGRANFTKWLSDSEALPFITLAYIQASHWLLPPPTLH 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2263 381 FunFam Pectinesterase 80 376 - -
Lele08g2263 381 SUPERFAMILY Pectin lyase-like 84 375 IPR011050 -
Lele08g2263 381 Gene3D - 79 377 IPR012334 -
Lele08g2263 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 77 374 - -
Lele08g2263 381 Pfam Pectinesterase 85 370 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2263 Lele-ChrLele08 28236579 28240193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2263 15 380 Carbohydrate Esterase AT1G69940 54.496 7.49e-143 408