Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2255 ATGGCCAGCCCAAACAGCAAGCCTATCATAGAAGAAGAAGAACAGAAACAGAAAGCTCCTCCTGCTGACAATGGGCATTCAATTATCAAACCTACAATCTCTGAGTTCAGTGGCGTTCACGCTGATGAAAAGTTGGCTAATGTGATTGCTTGCTATGTCGACTCGCTAAAGCATCTAAAAGATATTTGCTATCCAACTAATCAAGACATAAACTATGAAGAAGTGATGAAGTTGATATGTCTTCGCTTAAACAATGCCGGTGATCCATTTACAGGGAGTAGCTACAAGCTTAATTCATTTAACTTTGAGCTTTGTGTATTAGATTGGTTTGCTAATCTTTGGGAAATTGAGAAGAATGAGTACTGGGGATATGTTACAAATGGTGGAACAGAAGGAAATCTTTATGCAATCTTAGTGGGGAGGGAACTTTATTCAGATGGAATTTTGTATACATCAAAAGAATCGCATTATTCATTGTTCAAGATAGCAAGAATAGCTAGAGTCAAGTGTGTGGTAGTTGGGACCAAGCTCTCTGGTGAGATTGACTATGATGAACTAAAGGCTTCACTTCTTTCTCACAAGGACCTACCAGCCATCATCAACCTAAACCTGGGTACTCTCTTTCTCTATCAGTCTATGTATAGAACCGGTTTTGATACTCATCATAGGGAAGGTACAACCATAAAAGGAGGTATTGATGACCTTGATGTTGTACTACAAATACTTGTGGACTGTGGCTTCACACAAGATCGATTCTACATTCACTGTGATGCTGCTTTATTCGGACTGATGCTCCCATTTATTAACGGAGCACCAAATATTTCTTTCAAGAAGCCTATTGGAAGTGTAACTGTTTCAGGCCATAAGTATCTTGGAAGCCCAATCCCATGTGGTGTTCTGATAACTCGTTTGAATTATGTTGACCTTCTCTCTAGAGATGTAGAATGCCTCGCTTCGAGAGACACCACAATCTCAGGAAGCCGAGGAGGCCATACTTCAATCTTCCTCTGGTATGCTCTCAACAAGAGAGGCTTCAATGGCCTTCAAAAAGATGTGAATGAATGCATCAACAAGGCGATCTATCTTCGAAATCGCCTGAGGGAACATGGCGTCGGCGTCATGCTCAATAAGTTCAGCAATATCGTTGTGTTCGAGAGGCCTTGTGATGATGCATTTGCTAGCAAGTGGATTTTAGCTAGCGAAGGAAAACTATCACACATAGTGGCCTTGCCACATGTGACCATGAAAGTTCTAGATTTGTTTGTGAGCGAGTTTGTGAAGAATCGAAAGATTTGGTATGAAGATTATGAAGGCAGCAAGAAAGTTCCCTGCATTGCAGAGGATATTGGTGCTAACAACTGTGCTTGTTCTTTCCATACTAAATAA 1386 0.4084 MASPNSKPIIEEEEQKQKAPPADNGHSIIKPTISEFSGVHADEKLANVIACYVDSLKHLKDICYPTNQDINYEEVMKLICLRLNNAGDPFTGSSYKLNSFNFELCVLDWFANLWEIEKNEYWGYVTNGGTEGNLYAILVGRELYSDGILYTSKESHYSLFKIARIARVKCVVVGTKLSGEIDYDELKASLLSHKDLPAIINLNLGTLFLYQSMYRTGFDTHHREGTTIKGGIDDLDVVLQILVDCGFTQDRFYIHCDAALFGLMLPFINGAPNISFKKPIGSVTVSGHKYLGSPIPCGVLITRLNYVDLLSRDVECLASRDTTISGSRGGHTSIFLWYALNKRGFNGLQKDVNECINKAIYLRNRLREHGVGVMLNKFSNIVVFERPCDDAFASKWILASEGKLSHIVALPHVTMKVLDLFVSEFVKNRKIWYEDYEGSKKVPCIAEDIGANNCACSFHTK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2255 461 PANTHER - 224 460 - -
Lele08g2255 461 Gene3D Aspartate Aminotransferase, domain 1 341 429 IPR015422 GO:0003824
Lele08g2255 461 Gene3D - 82 340 IPR015421 GO:0003824
Lele08g2255 461 SUPERFAMILY PLP-dependent transferases 71 428 IPR015424 -
Lele08g2255 461 Pfam Pyridoxal-dependent decarboxylase conserved domain 225 371 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele08g2255 461 MobiDBLite consensus disorder prediction 1 25 - -
Lele08g2255 461 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 282 303 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2255 Lele-ChrLele08 28077196 28082620 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2255 225 370 Calmodulin-binding Proteins AT2G02010 28.387 1.57e-07 51.6