Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2251 ATGGAGAATGAAATATTCCCTTTCCTTTCATCCGAAATTGCTGCATTTCAGGTTTCGCCATTAATGGCTGGCCCAAACAGCAAGCCTATCAAAGAAGAAGAAGGACAGAAACAGAAAACTCCTCCTGCTGAGAATGGGCATTCAAATATCAAACCCACAATCTCTGAGTTCAGTGGCGCTGACACTGATGAAAAGTTGGCTAATGTGATTGCTTGCTACGTCGACTCGCTAAAGCATCTAAAAGATATTTGCTATCCAACTAATCAAGACATAAACTATGAAGCATTGATGAAGTTGATATGTCTTCGCTTAAACAATGCCGGTGATCCATTTACAGGGAGTAGCTACAAGCTTAATTCATGTAACTTTGAGCTGTGTGTATTAGATTGGTTTGCTAATCTTTGGGAAATTGAGAAGAATGAGTACTGGGGATATGTTACAAATGGTGGAACCGAAGGAAATCTTTATGCAATCTTAGTGGGGAGGGAACTTTATCCAGATGGAATTTTGTATGTGTCAAAAGAATCGCATTATTCATTGTTCAAGATAGCAAGAATAGCTAGAGTTAAGTGTGTGGTAGTTGGGACCAAGCCCTCTGGTGAGATTGACTATGATGAACTAAAGGCTTCACTTCTTGCTCACAAGGACCAACCAGCTATCATCAACCTAAATCTGGGTACAACGATAAAAGGAGGTATTGATGACCTTGATGTTGTACTACAAATACTTGAGGACTGTGGCTTCACACGAGATCGATTCTACATTCACTGCGATGCCGCTTTATTCGGACTGATGCTCCCATTTATTAACGGAGCACCAAAGATTTCTTTCAAGAAGCCTATTGGAAGTGTAACTGTTTCAGGCCATAAGTATCTTGGAAGCCCCGTCCCATGTGGTGTTCTGATAACTCGTTTGAATTATGTTGACCTTCTCTCTAGAGATGTAGAATACCTCGCTTCGAGAGACACCACAATCTCAGGAAGCCGGGGAGGCCATACTTCAATCTTCCTCTGGTATGCTCTCAACAAGAGAGGCTTCAATGGCCTTCAAAAAGATGTGAATGAATGCATCAACAAGGCGATCTATCTTCGAAATCGCCTGAGGGAACATGGCGTCGGCGTCATGCTCAATAAGTTCAGCAATATCGTCGTGTTCGAGAGGCCTTGTGATGATGCATTTGCTAGCAAGTGGATTTTAGCTAGCGAAGGAAAACTATCACACATAGTGGCCTTGCAACATGTGACCATGGAAGTTCTAGATTTGTTTGTGAGCGAGTTTGTGCAGAATCGAAAGATTTGGTATGAAGATTATGGAGGCAGCAAGAAAGTTCCCTGTATTGCAGAGGATATTGGTGCTAACAACTGTGCTTGTTCTTTCCATAACAAATAA 1389 0.4183 MENEIFPFLSSEIAAFQVSPLMAGPNSKPIKEEEGQKQKTPPAENGHSNIKPTISEFSGADTDEKLANVIACYVDSLKHLKDICYPTNQDINYEALMKLICLRLNNAGDPFTGSSYKLNSCNFELCVLDWFANLWEIEKNEYWGYVTNGGTEGNLYAILVGRELYPDGILYVSKESHYSLFKIARIARVKCVVVGTKPSGEIDYDELKASLLAHKDQPAIINLNLGTTIKGGIDDLDVVLQILEDCGFTRDRFYIHCDAALFGLMLPFINGAPKISFKKPIGSVTVSGHKYLGSPVPCGVLITRLNYVDLLSRDVEYLASRDTTISGSRGGHTSIFLWYALNKRGFNGLQKDVNECINKAIYLRNRLREHGVGVMLNKFSNIVVFERPCDDAFASKWILASEGKLSHIVALQHVTMEVLDLFVSEFVQNRKIWYEDYGGSKKVPCIAEDIGANNCACSFHNK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2251 462 SUPERFAMILY PLP-dependent transferases 92 429 IPR015424 -
Lele08g2251 462 PANTHER - 52 461 - -
Lele08g2251 462 Pfam Pyridoxal-dependent decarboxylase conserved domain 122 372 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele08g2251 462 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 283 304 IPR021115 GO:0016831
Lele08g2251 462 MobiDBLite consensus disorder prediction 24 52 - -
Lele08g2251 462 Gene3D - 103 340 IPR015421 GO:0003824
Lele08g2251 462 Gene3D Aspartate Aminotransferase, domain 1 341 430 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2251 Lele-ChrLele08 28020148 28024342 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2251 225 371 Calmodulin-binding Proteins AT2G02010 29.412 1.74e-08 54.7