Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2250 ATGCCGGAGATGATGGCGGTGAATGTTGCAGCTAATTCCAACTCCAACGCCTCCGCCGGCGTTAATGGTGGTCATCAGTTCGGCGACACCACGCTCACCAAAGTGTTCGTTGGAGGATTGGCTTGGGAGACTCCCAAAGACGCCATGAGAGAGCATTTCGAGAAGCACGGCGAGATCCTCGAGGCCGTTATTATCTCCGATAAGGCCACCGGCAGATCCAAGGGATATGGCTTCGTGACCTTTAAGGAAGCTGAAGCTGCTAAGAAGGCTTGTGAGGATCCTACGCCGATCATCAATGGCCGCCGAGCCAACTGCAATCTGGCTTCGCTCGGCGCCCGGCGCCCTAGGTCCACCAACACTTCACCGCCTCGTCAACAAGGATCGAACAGCGGAGGACCAAGGAATGCCCAAAGCGCACCACCCCCGCCAGCCAATAACATCCCCTGGTATTATCCCGTGGGGACACCTGCTTCACATTTCCATCACCACCACCATCAACCTGTTCCTCTCTATGGGTACCCCCAAACGTACATTCCAACTGACATAAATTACAATCAGAAGCTAAGCTACACTGGCGGTGGGCCCTACATGAATGGTTACTACTCTCCAATGTACCCGAGCCAGGCTATGGTGGGTGGGAACACATTGATGCCGATGTACCCTCTTTATCAGTACCATCAAACGCACACGATGGGCCACCCTGCTCACATATTCCAGCCAACCACAGCGGGGCACGTGGCCATCATTTCGAAGCCAGCGTCCATCCCTCCCAACCCAGGTGCGTCACATGGTAACATGCCCAACCCCAGTCAAATGTCTGTGAGGAGCAACACGAATCATTGTGGTCACGTGACCCTGTGA 861 0.5482 MPEMMAVNVAANSNSNASAGVNGGHQFGDTTLTKVFVGGLAWETPKDAMREHFEKHGEILEAVIISDKATGRSKGYGFVTFKEAEAAKKACEDPTPIINGRRANCNLASLGARRPRSTNTSPPRQQGSNSGGPRNAQSAPPPPANNIPWYYPVGTPASHFHHHHHQPVPLYGYPQTYIPTDINYNQKLSYTGGGPYMNGYYSPMYPSQAMVGGNTLMPMYPLYQYHQTHTMGHPAHIFQPTTAGHVAIISKPASIPPNPGASHGNMPNPSQMSVRSNTNHCGHVTL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2250 286 MobiDBLite consensus disorder prediction 111 135 - -
Lele08g2250 286 Gene3D - 25 139 IPR012677 -
Lele08g2250 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 110 IPR000504 GO:0003723
Lele08g2250 286 MobiDBLite consensus disorder prediction 264 286 - -
Lele08g2250 286 PANTHER BOULE-RELATED 14 271 IPR037366 -
Lele08g2250 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 92 IPR000504 GO:0003723
Lele08g2250 286 SMART rrm1_1 34 106 IPR000504 GO:0003723
Lele08g2250 286 MobiDBLite consensus disorder prediction 253 286 - -
Lele08g2250 286 CDD RRM_RBM24_RBM38_like 33 108 - -
Lele08g2250 286 SUPERFAMILY RNA-binding domain, RBD 30 135 IPR035979 GO:0003676
Lele08g2250 286 FunFam Putative RNA-binding protein ARP1 27 116 - -
Lele08g2250 286 MobiDBLite consensus disorder prediction 110 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2250 Lele-ChrLele08 27994769 27996949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2250 29 109 C2H2 Transcription Factor Family AT2G19380 41.975 6.74e-16 75.9