Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2243 ATGTTGGATCTCAATGTCGATATGGAAGGTTCTCAGCTCCAAAGGGAAGAAGACTCTGGGACTTCCAACTCCTCTGTGCTGAATTTCGAAGAATCTCGAGACGAAGATTCGTCGGCCTTCGTGTTCGACATACTGAAGAGAGAAACAGATTGTCGGGTTGAGGATGAAGAGAAGGAGACGCCAGAAGAAATCACGACAAAGCCACTTTTCCCGATGAACAGTGAAGACAAGGGGCGCAGAGATTGTGATTTCCGATTGGGATTCTCATGTTCGAGAAGTAATCAATGGCTGAACCTTTCCTTCGCTGAGAGTGGTGCTGCTGGCACGCAAGGTGAATTGAGAGTGTTACCGCAAAAGCAACCCCAAACCAGGAAAAGCAGAAGAGGGCCCAGGTCTCGAAGCTCACAGTACAGGGGTGTTACTTTCTATCGCAGAACTGGTCGCTGGGAATCCCATATATGGGATTGTGGGAAGCAAGTCTATTTAGGTGGATTTGACACTGCGCATACTGCAGCAAGAGCATATGATAGGGCTGCAATTAAGTTCAGAGGAGTTGATGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAGGTTTGAGTAAAGAGGAGTTTGTCCAAGTCCTTCGCCGCCAGTGCTCTGGTATCCCGAGAGGGAGCTCAAAATATAGAGGTCTGTCTCTCAACAAATGGGGTCAATGGGAGGCACAAGCCAGCCCTTTCCTTGGCAAAAAGCTTTATGACAAGCTGCCCATCAAGAGTGATGGAATAGGATTGGTGACTAGCGTTGAGCCTAGCAAGGGAGAGAGAACTATTGAGTCCAGCAGAGGAGGGAATAATCAAAATCTTGATTTGAGCCTTGGAATTTCCCCACCTTGTAATGAATCCGAGAAGAATGACGCTGCGAGAGGCTTTTCTTTTCGTTATGCAGCTTGTGAGACACCCAACAAAGGAGGGCCAATGGCTGATGGCACTGGTGCTGCAATAATAAGGGGACAAGCCATTTATGGTGTGGCAATGCCATCTAAATATGACCAAATATGCTCTGGCTTATATCCTGGTTACGTACAGGATTACGAGGTGTCTATCTCCCCTTTGCACAAATGCCAGGAGAAGGCCATAGAAAAAAGAAGTGAAGTTGTTCCTTTATCAAGATTCCCAAATCTGGCTTGGCAACTTCACAGCAACGGCAGCATCACGTCGGTGCCGGTGTTTTCTAATGCAGCATCATCAAAATTCATATCTTCAAGCAACAATGGTGGACCAGCCCCACATCCAATAATCAACCCTCTTAATAACATTCCATCTACAATCTATGCTTCATTTCAACCCCAACATCCACACTTAATAACTCCCCAAGTTGCCAAAGTCTTAGTAGCTGAAATTAAAGATCCATGA 1416 0.4583 MLDLNVDMEGSQLQREEDSGTSNSSVLNFEESRDEDSSAFVFDILKRETDCRVEDEEKETPEEITTKPLFPMNSEDKGRRDCDFRLGFSCSRSNQWLNLSFAESGAAGTQGELRVLPQKQPQTRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINFSLSDYEEDMKMMKGLSKEEFVQVLRRQCSGIPRGSSKYRGLSLNKWGQWEAQASPFLGKKLYDKLPIKSDGIGLVTSVEPSKGERTIESSRGGNNQNLDLSLGISPPCNESEKNDAARGFSFRYAACETPNKGGPMADGTGAAIIRGQAIYGVAMPSKYDQICSGLYPGYVQDYEVSISPLHKCQEKAIEKRSEVVPLSRFPNLAWQLHSNGSITSVPVFSNAASSKFISSSNNGGPAPHPIINPLNNIPSTIYASFQPQHPHLITPQVAKVLVAEIKDP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2243 471 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 106 287 - -
Lele08g2243 471 MobiDBLite consensus disorder prediction 110 137 - -
Lele08g2243 471 FunFam AP2-like ethylene-responsive transcription factor 135 194 - -
Lele08g2243 471 Gene3D AP2/ERF domain 135 194 IPR036955 GO:0003700|GO:0006355
Lele08g2243 471 SMART rav1_2 136 198 IPR001471 GO:0003700|GO:0006355
Lele08g2243 471 MobiDBLite consensus disorder prediction 271 290 - -
Lele08g2243 471 ProSiteProfiles AP2/ERF domain profile. 136 192 IPR001471 GO:0003700|GO:0006355
Lele08g2243 471 SUPERFAMILY DNA-binding domain 135 193 IPR016177 GO:0003677
Lele08g2243 471 CDD AP2 136 191 IPR001471 GO:0003700|GO:0006355
Lele08g2243 471 MobiDBLite consensus disorder prediction 52 74 - -
Lele08g2243 471 MobiDBLite consensus disorder prediction 1 36 - -
Lele08g2243 471 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2243 Lele-ChrLele08 27949518 27952918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2243 1 419 AP2-EREBP Transcription Factor Family AT5G60120 40.254 9.37e-69 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g2243 AP2 6.9e-10 CL0081