Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2224 ATGCAGGAAAAATTTTCACAGACCCAGAAAGAAATAATCATGCTTTGCTCAAAACTACTTCGATTTCTGCTTCTTCCTCGCTTCTTCTTCTTCTTCTTCTCCACCATTACAGCGCTTAGTATTTCACCAGGTTCTACACTTTTTGCTTCTGATACAAACCAAACATGGCCTTCTCCAAGCAACGCTTTCTCTCTCCGCTTCCTTCCTTCTCAAACCCCAGCCACTTCTCCTCCCTCCTTCATTGCCGCCGTCGTCTTCTCCGGCGGCACACCTGTTGTTTGGTCTGCCGGTAACGGTGTCACCGTGGACTCCCGTGGCTCGCTTCAGTTTCTATCATCTGGCGTCCTTAGCCTCGTTAACGGCTCCGGCGTCGCTGTTTGGGACTCGGGTACTTCCAATTTGGGCGTCTCTTCCGCCACCTTAAACGATGACGGAAACTTGATTCTCTCCAACCGAACCGGCGTCGTTTGGTCGAGCTTCAACCATCCCACTGATACCATCGTGCCTTCTCAGAATTTCACAATCGGCATGGTTTTGCGATCTGGTGAGTATTCATTTACAGTTACTAGGTCAGGGAACCTCACACTTCGGTGGAACGCTAGTGTAGCGTACTGGGATCGTGGTCTAAATTCATCTGTAAATGTCAATTTAACTTGGCCGGTTTTAGGATTACAATCTAAAGGGATTTTGAGACTTTCCGATCCGAAATTGGTGACTCCTCTGGATATTGCCTATAGCAGCGATTATGCTGAAGCGAACGGCACTCTGAGAATTCTCAAGTTAGAGAGGGATGGGAACTTGAGAATTTACAGTTCCTCTAGAGATAGTGGAATTTCTACTGTAAGATGGGTAGCTATTGAAGATCAATGTAAGGTTTTTGGGTATTGTGGGAACTATGGGGTATGTAGTTACACGGATTTAAACCCAATTTGTGAATGCCCATCTGAGAATTTTGAGATGATTGATCGTAATGATAGTAGAAAAGGATGTAGAAGAAAGTTGAGGCTTGAGGATTGTCCTGGTAGGGCTGCTATGTTACAATTGGATCATGCTCTAGTTTTGACTTATCCTCCTATATTCATGGTTAATCCGGAAGTATTTTTCATCGGTATATCGGCTTGCAGTGGAAATTGCCTTGCAGCTGGTTCTTGTTTTGCTTCTACTTCATTATCAGATGGCACAGGTCTGTGTTACATAAAGACATCTAGTTTCATAAGTACCTACCACAATCCATCACTACCCAGCACTTCATATGTTAAGGTTTGTGGACCGGTGGCGTCAAACCTGCCACCTAGTTTGGAGGAAGCCGGGAAGGGAAAGGATTGGGAGATACATGCTTGGATTGTTGTAGTTGTTGTTCTTGGTACTCTTTTAGCTTTGATTTTAATTGAGGGTGGTTTATTGTTGTGGTGTTGTAAACATGATTCGAGGTTTCGCAGATTCTCTACTCAGTATGCTCTTCTTGAGTATGCTTCTGGAGCACCAGTTCAGTTCTCATACAAAGAGCTTCATCGATCGACAAAAGGGTTCAAAGAGAAGCTCGGTGATGGAGGATTTGGTGCTGTTTACAGAGGAACTCTCACGAACAGAACCGTTGTTGCAGTGAAACAACTTGAGGGCATTGAGCAAGGTGAGAAACAGTTCAGAATGGAGGTTGCTACTATAAGCAGCACTCACCATTTGAACTTGGTGAGGCTGATTGGGTTTTGTTCTGAAGGAAAACATAGGCTTTTGGTTTATGAGTTCATGAAAAATGGGTCTCTTGACAATTTTCTTTTTGTCGATGAACATCATCATCAATCTGAGAAATTGTTGAATTGGGAGTACCGATTCAAGATCGCACAGGGCACTGCGAGGGGAATCACATACCTTCATGAGGAGTGTAGAAACAGCATTGTCCACTGTGATATAAAACCTGAAAACATTCTCTTAGATGAGAATTACAACGCAAAAGTCTCAGATTTTGGCCTTGCAAAACTCACGAGTGCCACAGACGAAAGGAACCGAAGCCTGCCAAGTGTAAGAGGAACCAGAGGATATTTAGCTCCGGAATGGCTTGCAAATATTCCTGCAACTTGTAAATCCGATGTTTATAGTTTTGGAATGGTTTTGCTGGAGATAGTGAGTGGAAGAAGGAATTTCGAAGTCTCGGAAGGAACAAAGCGGATGAAGTTCTCCATGTGGGCTTATGAAGAGTTCCTGAAGGGTAACATGAAGGGAGTTGTGGACAGAAGATTAGCTAATAACCATGAAGTTGATATGGAGGAAGTGAAAAGGGCTATAATGGTGAGTTTCTGGTGCATTCAAGGGCAGCCATCTCAGAGGCCAAAAATGAGCAAAGTGGTGCAGATGCTAGAAGGAATCACTGAGATTGAGATGCCACCAGCTCCAAAATCTGTGACAGAAGGATATGTTATTGCAAACTCCATTGTCGCTGAAGAAGCTTCGTTCTTCTCCTCATCTTCCACGTCACAAATCATATAG 2484 0.4388 MQEKFSQTQKEIIMLCSKLLRFLLLPRFFFFFFSTITALSISPGSTLFASDTNQTWPSPSNAFSLRFLPSQTPATSPPSFIAAVVFSGGTPVVWSAGNGVTVDSRGSLQFLSSGVLSLVNGSGVAVWDSGTSNLGVSSATLNDDGNLILSNRTGVVWSSFNHPTDTIVPSQNFTIGMVLRSGEYSFTVTRSGNLTLRWNASVAYWDRGLNSSVNVNLTWPVLGLQSKGILRLSDPKLVTPLDIAYSSDYAEANGTLRILKLERDGNLRIYSSSRDSGISTVRWVAIEDQCKVFGYCGNYGVCSYTDLNPICECPSENFEMIDRNDSRKGCRRKLRLEDCPGRAAMLQLDHALVLTYPPIFMVNPEVFFIGISACSGNCLAAGSCFASTSLSDGTGLCYIKTSSFISTYHNPSLPSTSYVKVCGPVASNLPPSLEEAGKGKDWEIHAWIVVVVVLGTLLALILIEGGLLLWCCKHDSRFRRFSTQYALLEYASGAPVQFSYKELHRSTKGFKEKLGDGGFGAVYRGTLTNRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGKHRLLVYEFMKNGSLDNFLFVDEHHHQSEKLLNWEYRFKIAQGTARGITYLHEECRNSIVHCDIKPENILLDENYNAKVSDFGLAKLTSATDERNRSLPSVRGTRGYLAPEWLANIPATCKSDVYSFGMVLLEIVSGRRNFEVSEGTKRMKFSMWAYEEFLKGNMKGVVDRRLANNHEVDMEEVKRAIMVSFWCIQGQPSQRPKMSKVVQMLEGITEIEMPPAPKSVTEGYVIANSIVAEEASFFSSSSTSQII 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2224 827 PANTHER OS07G0415500 PROTEIN 16 797 - -
Lele08g2224 827 SMART serkin_6 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2224 827 ProSiteProfiles Bulb-type lectin domain profile. 164 282 IPR001480 -
Lele08g2224 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 37 162 - -
Lele08g2224 827 SUPERFAMILY Protein kinase-like (PK-like) 490 786 IPR011009 -
Lele08g2224 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 208 IPR036426 -
Lele08g2224 827 PIRSF SRK 10 826 IPR024171 GO:0004674
Lele08g2224 827 Gene3D - 37 162 IPR036426 -
Lele08g2224 827 Pfam D-mannose binding lectin 92 175 IPR001480 -
Lele08g2224 827 Pfam S-locus glycoprotein domain 251 314 IPR000858 GO:0048544
Lele08g2224 827 Gene3D Phosphorylase Kinase; domain 1 473 582 - -
Lele08g2224 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 163 285 - -
Lele08g2224 827 FunFam S-receptor-like serine/threonine-protein kinase 479 582 - -
Lele08g2224 827 Pfam Protein kinase domain 511 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2224 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Lele08g2224 827 Gene3D - 163 283 IPR036426 -
Lele08g2224 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 795 - -
Lele08g2224 827 CDD STKc_IRAK 514 788 - -
Lele08g2224 827 Gene3D Transferase(Phosphotransferase) domain 1 583 799 - -
Lele08g2224 827 ProSiteProfiles Bulb-type lectin domain profile. 38 162 IPR001480 -
Lele08g2224 827 SMART blect_4 47 163 IPR001480 -
Lele08g2224 827 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Lele08g2224 827 ProSiteProfiles Protein kinase domain profile. 508 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2224 Lele-ChrLele08 27710450 27712933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2224 469 795 Receptor kinase-like Gene Family AT5G20050 42.730 8.47e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele08g2224 Pkinase 1e-49 CL0016