Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2201 ATGACTGTGGTGTCGGATTCTTCTCCTGAGTCTTTCAGCCACATGATGGCTTCTATGCCCGGGTTTCGATTCCATCCTACCGATGAGGAACTGATCATGTACTATCTGAAGAGGAAGATGTGTAGGAGAAGGCTGAAGCTCGATGTAATTCGTGAAACTGATGTCTATAAGTGGGATCCTGAGGAATTGCCTGGGCAGTCAGTGCTGAAAACTGGAGATAGGCAATGGTTCTTTTTCAGCCCTAGAGACAGAAAGTATCCTAATAGTGGTAGGACCAATCGAGCTACAAGACATGGGTACTGGAAAGCAACAGGGAAGGATCGTAACATTACCTACAATTCTCGGGCAGTTGGGGTGAAAAAGACACTGGTTTTCTATAGAGGTAGAGCACCACATGGTGAGCGAACTGATTGGGTTATGCATGAGTACACATTGGAAGAAGAAGAACTTGCAAGATGCCAGAATTGTAAGGACTATTATGCACTTTACAAGGTGTTTAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAACAATATGGTGCACCATTTGTAGAAGAAGAATGGTTTGGTGATGACTTTGTAGATTTTAATGTTAATTCAGCTGGCAAGGAGGCTCTGATTTCACAAGTCGATGAGGGTACTTCTGTTGATACTGTGACTTATAATGGTCAAGTGCAGCATTTGTTTGATGATGAACTTGATGAGATCTTGAACAAAATGATGGATGAGCATGTTCCTGACCAGCCCCCGCTGTGTCCTGCTGTAGCTCAGGTTGCTGCTGAAGAAACACAAAGTGTGGTGGTAGATCAAATTTCTAAGGAGGTGACATGTGCTGAGCAAATCGAAATGTTTCATTCAAGTGGTCACTACCATGACCCTACCCTATTAGCTACCCACGTGCATGTTTCTGAAGGACCTGAAGTCACTTCTGCTCCCAGTGTTCAAGTAGAGGAGCCTTTCTTTCAGGAGGATGACTTCTTGGAAATGAATGATCTCATTGAACCTGAACCAGCATTGCCCAGAATAGAAAATCCTTTGCAGAACTTAGAGTTTGAAGATGGATTAAGTACTCTTGACTTGTACCATGATGCAGAGATGTTTCTCCGTGACATGGGGCACATTGACCAGGAAACTGTTTCACATCCTTATATGAATACTTTTGACAGTAACGTTGTGAATCAGCATTATCAGTCTCTGCCCCTTGGAGACAATGTAGATCAAAGTGGTGAACTCTGGATGCGTCATGAAAGGCACATCATGAGTCCAGCAGAACATCCTAATGTTTCTTTCTCTTCATCAACCTCAGGTGTGAGTTATGAATCTGCCAGCTTGCCTGCCGAAGGTAATCGTAATCAAAGTAGCAGTGTGAGCCAAGTTGCTACAAGTAGATTGTCTTCTGCTCTCTGGGCCTTCCTTGAGTCAATACCTACCACTCCTGCATCTGCTGCCGAAAATGCAAATCGGGCTCTCGAGCGGGTGTCTAGCTTTAGTAGGGTAAGAGATAATATGAAGCAGGCAAGCATAGCTGCTGCTAATGAAACTGCAATTGTGAAGAGAGCAGGTAAAGAAAGAGGAATCTTCTTCCGATTCTTGCCAGTTCTTGTTGCTTTATGTGCTTTTTTATGGGTTTCTATGGGAACATTGAGACTACTTGGGAGATTCATCCCTTGA 1671 0.4369 MTVVSDSSPESFSHMMASMPGFRFHPTDEELIMYYLKRKMCRRRLKLDVIRETDVYKWDPEELPGQSVLKTGDRQWFFFSPRDRKYPNSGRTNRATRHGYWKATGKDRNITYNSRAVGVKKTLVFYRGRAPHGERTDWVMHEYTLEEEELARCQNCKDYYALYKVFKKSGPGPKNGEQYGAPFVEEEWFGDDFVDFNVNSAGKEALISQVDEGTSVDTVTYNGQVQHLFDDELDEILNKMMDEHVPDQPPLCPAVAQVAAEETQSVVVDQISKEVTCAEQIEMFHSSGHYHDPTLLATHVHVSEGPEVTSAPSVQVEEPFFQEDDFLEMNDLIEPEPALPRIENPLQNLEFEDGLSTLDLYHDAEMFLRDMGHIDQETVSHPYMNTFDSNVVNQHYQSLPLGDNVDQSGELWMRHERHIMSPAEHPNVSFSSSTSGVSYESASLPAEGNRNQSSSVSQVATSRLSSALWAFLESIPTTPASAAENANRALERVSSFSRVRDNMKQASIAAANETAIVKRAGKERGIFFRFLPVLVALCAFLWVSMGTLRLLGRFIP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2201 556 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Lele08g2201 556 SUPERFAMILY NAC domain 15 168 IPR036093 GO:0003677|GO:0006355
Lele08g2201 556 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 262 - -
Lele08g2201 556 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Lele08g2201 556 FunFam Nac domain-containing protein 86 27 171 - -
Lele08g2201 556 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2201 Lele-ChrLele08 27316455 27319947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2201 4 553 NAC Transcription Factor Family AT1G34190 45.283 2.62e-145 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele08g2201 NAM 2.7e-36 No_clan