Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2181 ATGGCGGGAGCTACAGGTAGAGCGTTTATGACTCTCTCCCTAAACTCCAACCTCTCTACGTTTGCACGCTTATCTCATGGCCACACCATTCCATTTCTCAAACTGACTGCAAGACCCGGTAGGGTTTTTCTAGGGTTTAGGCACCTCTGCTCTGTCACCTCCACCGCCACCACGCCCACCGTTCCCGACTCGACGGAGTCCATTGATCCTGACCAAATCAAGCACTCAATTCTTCTTGAGAGACTCAGATTCAAGCACCTTAAGGACGCTGCAAACACCCCAGAAATCAAGAATTCAAGGAAATCAATTGCTATCTCTGAGAAGGGTCGTGAGAATGAGGGGAAGAAGTCAGAGAAAAAGAAGTTGGTGGGAAGTTTTGAGGAGTTGGGCCTCAGCGATGAGGTAATGGGAGCCGTGAAGGAGATGAATATTGAGGTTCCTACTGAGATTCAGTGTATCGGCATCCCTGCTGTCTTGGAAGGGAGGAGTGTCGTTTTGGGATCCCATACTGGTTCTGGCAAGACTCTAGCTTACATGCTTCCCCTTGTTCAGTTGCTTAGACAGGATGAACAATTGAATGGATTACTTATGAAGCCCAGGCGTCCCCGAGCTGTTGTGCTATGCCCTACAAGGGAGTTGTCTGAGCAGGTGTTTCGAGTTGCAAAATCTATCAGCCACCATGCAAGATTAAGGTCTACAATGGTAAGTGGGGGTGGCCGTCTCAGGCCTCAGGAGGATTCATTAAATAACCCCATTGACTTGGTTGTTGGTACTCCGGGCAGAATTCTGCAGCACATTGAGGAAGGCAACATGGTATATGGTGACATCAAATACTTGGTGTTGGATGAGGCAGACACAATGTTTGATCGAGGTTTTGGTCCTGATATACGCAAGTTTATTGGCCCGCTAAAGAATCGTTCATTAAAACCTGATGGCCTAGGCTTTCAGACTATCTTGGTTACTGCAACCATGACAAAGGCAGTGCAAAAGCTGGTTGATGAGGAGTTTCAAGGCATTGTGCATCTACGAACATCAACACTGCATAAAAAGATTGCTTCTGCTCGTCATGATTTTATTAAGCTATCTGGTTCTGAAAACAAGATGGAGGCATTACTACAGGTTCTGGAGCCAAGCCTGGCAAAAGGGAATAGAGTGATGGTTTTCTGCAATACATTGGATTCTAGCCGTGCAGTGGATCATTTTCTCAGTGAAAATCAGATATCTACTGTCAATTACCATGGAGAGGTACCAGCAGAGCAAAGGGTTGAAAACCTCAAGAAGTTTAAAAGTGATGAAGATGATTGCCCTACACTAGTTTGCACGGACTTGGCTGCTAGGGGTCTGGATTTGGATGTTGATCATGTTATCATGTTTGATTTTCCCTTTAACTCTATTGACTACCTTCACCGAACTGGTAGAACAGCTCGTATGGGTGCAAAAGGAAAAGTAACTAGCTTAGTTGCAAAAAAAGACGTAACCTTGGCTGCTCGAATAGAAGAAGCAATAAGGAAGAATGAGAGCTTGGAGGCTATAAGTAAAGACAGTCTTAGGAGGGAAATTGCTAGGCCCCAAATAACTCAGCAGAAGGGAAAGAATACCAAATTGGTAAAGGTTTCCAGAACGAAAAGCACTTCTACTCTCCATGCCGCTTCCAGAAAAACATCGAAGAAGCCCTCTGCATCAAAAGTATCTAAAAGTTCTTCTAGTGTTAACACGGGTTCTAGAAAAGCGCCCAAACCATTAAAATCAGCAAAGGCAGGAGGGATTCAGGTTAAAAAATCTGTAAGATCTTCTAGTGCAAGTAGCCTGAAAAAAGCTTCGGTGGGTAAGAAGCAAAGTAAAAGAAGCAGTGCTAGCAAATCATCAAATTCTAAACTGAGTGTTGTTGGTTTTAGGGGGCGGAGTTCCTCAAACAAGAAGGAATCAAAATTTTGA 1935 0.4455 MAGATGRAFMTLSLNSNLSTFARLSHGHTIPFLKLTARPGRVFLGFRHLCSVTSTATTPTVPDSTESIDPDQIKHSILLERLRFKHLKDAANTPEIKNSRKSIAISEKGRENEGKKSEKKKLVGSFEELGLSDEVMGAVKEMNIEVPTEIQCIGIPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLLRQDEQLNGLLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARLRSTMVSGGGRLRPQEDSLNNPIDLVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFIGPLKNRSLKPDGLGFQTILVTATMTKAVQKLVDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKMEALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHFLSENQISTVNYHGEVPAEQRVENLKKFKSDEDDCPTLVCTDLAARGLDLDVDHVIMFDFPFNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLAARIEEAIRKNESLEAISKDSLRREIARPQITQQKGKNTKLVKVSRTKSTSTLHAASRKTSKKPSASKVSKSSSSVNTGSRKAPKPLKSAKAGGIQVKKSVRSSSASSLKKASVGKKQSKRSSASKSSNSKLSVVGFRGRSSSNKKESKF 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2181 644 Pfam Helicase conserved C-terminal domain 367 478 IPR001650 -
Lele08g2181 644 Pfam DEAD/DEAH box helicase 148 331 IPR011545 GO:0003676|GO:0005524
Lele08g2181 644 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 71 514 - -
Lele08g2181 644 MobiDBLite consensus disorder prediction 98 118 - -
Lele08g2181 644 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 124 152 IPR014014 GO:0003724
Lele08g2181 644 Gene3D - 85 343 IPR027417 -
Lele08g2181 644 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 155 342 IPR014001 -
Lele08g2181 644 MobiDBLite consensus disorder prediction 521 576 - -
Lele08g2181 644 CDD DEADc 135 334 - -
Lele08g2181 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 489 IPR027417 -
Lele08g2181 644 MobiDBLite consensus disorder prediction 592 635 - -
Lele08g2181 644 SMART helicmild6 396 478 IPR001650 -
Lele08g2181 644 MobiDBLite consensus disorder prediction 521 644 - -
Lele08g2181 644 Gene3D - 352 622 IPR027417 -
Lele08g2181 644 CDD SF2_C_DEAD 355 487 - -
Lele08g2181 644 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 367 517 IPR001650 -
Lele08g2181 644 SMART ultradead3 143 362 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2181 Lele-ChrLele08 26928855 26941667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2181 123 500 Eukaryotic Initiation Factors Gene Family AT3G19760 28.982 1.47e-42 157