Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2141 ATGGGCTCTCACCAGGTTAAGCCATCTAGGCCTGTGGAGAGGTTTGAATTGCAAAATAAGTATGCCGGAGATGGTGAATTTGTTGCTCATAGACGATCCATGGGGCAGAAATTTGATCGTACGGAGTATGGCCGGCAAAACCAGCGTGAACCCAGGAAGCATGAGGTTGAATCTGGTACTGGCAATGTTGTTCAAAGACAGGATGGTGATGTTGCTGGTGCAGAAAGAGCTAGAGTTAAGGGGAAATTGAATAACAGAGAGGGAAAGAAGGATGCTGTTCGTAATCATTCGAAGGTATCAAGGAAGTCTTTTGAAGATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAACGTTCCAAAGGAAGCATTGGATGGCTTGATTCCCAAGAGTGCTGAATCGTACATTATGATTAATAAGGTAGGGCAGGGAACTTATAGCAATGTTTATAAAGCTCGAGATCGAAACACTGGAGAATTAGTGGCCCTCAAGAAGGTGCGCCTTGACACATCAAAGCCTGAATGCATTAAATTCATGGCTAGAGAAATTATGATATTGCGGAGATTGGATCATCCCAATTTAGTAAAACTCAAAGGATTGGCTACTTCAAGAATGCATTATAGTCTTTACCTCGTTTTTGACTTCATGCAAACAGATTTGGCTAGAATAGTTTCTCGTCCTGAAGAGAGATTAACTGAACCACAGGTCAAGGCCTACATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGAAAGGGGCATTTTGCATAGAGATATCAAAGGATCAAACCTTTTGATTGATAAAAGTGGGATGCTTAAGATCGCAGATTTTGGGCTCGCCAATTATTATAATCCCAAACATAACCAGCCTCTCACAAGCAGGGTAGTGACACTATGGTACAGAGCTCCTGAGCTGTTGTTGGGTGCCACTGATTATGGAGTTGGTGTTGATTTATGGAGTGCTGGATGCCTCCTGGCAGAAATGTTTACAGGCGTTCCCATTATGCCTGGTAGAACAGAGGTGGAGCAACTTCATAGAATTTTTAGGCTATGTGGTACACCATCAGAGGGTTATTGGAAAAAATTCAAAGCTTCTGGGACTTTTAGGCCTCCAAAGTCTTATAGACCCTGCCTTGTAGAGACTTTCAAAGATCTCCCTTCTTCTTCTTTGGGTCTATTACGAACTCTGCTTGCCTTGGATCCTGCTTACCGTGGAACTGCATCTAAAGCTCTCCAAAATCAATTTTTCTATTCAAGTCCTTTGGCATGTGATCTTTCTGGTCTTCCTGTGATCAGCAATGAAGAAGAGCAAGATCAAGATGAACAAATCAAGCGCATGAATTCTAAAATTAGACGCTCACGTACATTACTTGAGCGTCGTAGAAAGAGCCTGCAGGTTTCTGAAAAGCCAGCAGAACCCACTATATCTTCTAAAGAGGAATCAAGAAAGAATGCTGATATGTACGTCCCACGTGAAGAACCGGGTAGTGCAACCACAACCAGTAGTACCTTGTCAAGTTTGAATCCTACTGAGACAAAGGATTCTTCACCTCTCTTCTCTCCAAATGTGTTCTCAGATAAGAAACTGCTTCTCAAAACACATTGTGATGATAATGATGGTAAAAACTTTGATAAATTTCCTCCTTTACCTAAGTTGAAATCACGTGCAGCCGCTGGGGGAGAAGATACTATGTACAAGTTTCGTCCCGTTCGCAGGTCTTCTTCCACAAGAGATTCCAGATTCTCAAGACAAAGGGACCGTTTACTCCTTGAAACAGAGGATCAGACTCCATAG 1800 0.4267 MGSHQVKPSRPVERFELQNKYAGDGEFVAHRRSMGQKFDRTEYGRQNQREPRKHEVESGTGNVVQRQDGDVAGAERARVKGKLNNREGKKDAVRNHSKVSRKSFEDEMVDGWPKWLVDNVPKEALDGLIPKSAESYIMINKVGQGTYSNVYKARDRNTGELVALKKVRLDTSKPECIKFMAREIMILRRLDHPNLVKLKGLATSRMHYSLYLVFDFMQTDLARIVSRPEERLTEPQVKAYMHQLLSGLQHCHERGILHRDIKGSNLLIDKSGMLKIADFGLANYYNPKHNQPLTSRVVTLWYRAPELLLGATDYGVGVDLWSAGCLLAEMFTGVPIMPGRTEVEQLHRIFRLCGTPSEGYWKKFKASGTFRPPKSYRPCLVETFKDLPSSSLGLLRTLLALDPAYRGTASKALQNQFFYSSPLACDLSGLPVISNEEEQDQDEQIKRMNSKIRRSRTLLERRRKSLQVSEKPAEPTISSKEESRKNADMYVPREEPGSATTTSSTLSSLNPTETKDSSPLFSPNVFSDKKLLLKTHCDDNDGKNFDKFPPLPKLKSRAAAGGEDTMYKFRPVRRSSSTRDSRFSRQRDRLLLETEDQTP 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2141 599 MobiDBLite consensus disorder prediction 26 73 - -
Lele08g2141 599 Gene3D Transferase(Phosphotransferase) domain 1 219 458 - -
Lele08g2141 599 Gene3D Phosphorylase Kinase; domain 1 126 218 - -
Lele08g2141 599 MobiDBLite consensus disorder prediction 567 599 - -
Lele08g2141 599 MobiDBLite consensus disorder prediction 81 100 - -
Lele08g2141 599 PANTHER CELL DIVISION PROTEIN KINASE 134 422 - -
Lele08g2141 599 MobiDBLite consensus disorder prediction 439 491 - -
Lele08g2141 599 Pfam Protein kinase domain 138 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2141 599 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Lele08g2141 599 ProSiteProfiles Protein kinase domain profile. 136 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2141 599 MobiDBLite consensus disorder prediction 496 524 - -
Lele08g2141 599 SMART serkin_6 136 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2141 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lele08g2141 599 MobiDBLite consensus disorder prediction 26 59 - -
Lele08g2141 599 SUPERFAMILY Protein kinase-like (PK-like) 132 423 IPR011009 -
Lele08g2141 599 FunFam Putative serine/threonine-protein kinase 219 455 - -
Lele08g2141 599 MobiDBLite consensus disorder prediction 435 524 - -
Lele08g2141 599 MobiDBLite consensus disorder prediction 539 599 - -
Lele08g2141 599 FunFam probable serine/threonine-protein kinase At1g54610 123 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2141 Lele-ChrLele08 26158504 26162776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2141 131 458 Core Cell Cycle Gene Families AT5G10270 42.651 1.54e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele08g2141 Pkinase 1.6e-68 CL0016