Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2134 ATGGATCACATCTTCCTAGCGGTCATCGCCGCCGTCGCTAGCTTCTTCGTCGTCACCCTCATCTTCGCCGCCATCATCCTCGTCTGCAACAGCAACAGCAACACCAATACCCCTCCCCCTCAGCGTCAAAACCGTGCCCGTACTCAGAATCGGACCCTGCCGGAGCTATCCTCCGTCGTCGTCGATGGTAGCTGGTCGTTCAATCCCGACGTTCAGATCACCTGGGACGAGATCACTAGAGCTACCGAGAACTTCTCGCCCGATCTCATCATCGGTGACGGCAGCTTCGGCCTTGTATACAAAGCGCGTCTCTCCAATAGCCTCGTCGTCGCCATCAAGAAGCTCTCGCCGGACGCATTCCAAGGATTTCGTGAATTCCGCGCCGAGATGGAAACCCTAACTAAGCTCCGGCATCGCAATATCGTCAAGATCCTCGGCTACTGGGCGGCGGGTCAGGAGAGAATGTTGTTCTACGAGTTCATGGAGAGAGGCAATCTTGATGAATGGCTTCACGATCCCACGATCCCATCGTCCTCTGGATACGACGACGTTTCAATGCCATGGGTCCCACTATCCTGGGAGCTGAGGTTGAAGATAATCAGGGGTATAGCAAATGGGCTTTCTTACTTACATGGGCTGGAGAAGCCAATTATTCATAGAGACATTAAAGCCAGTAATATCTTACTGGACTCTCACTTTGAGGCTCATATTGCTGATTTTGGACTTGCAAGGAGGATCGATACGTCAAACTCTCACGTGTCGACTCAGTTCGCCGGAACTATGGGGTACATGCCGCCGGAGTACAGAAATGGGGTGAATGTAGCCAACGTGAAGGTGGACGTCTATAGTTTTGGGGTTTTGATGCTAGAAACAGCGACGGGCCAGCGGCCCAATTTATCTGTGAAGTATGAGGATAGGGATATTGGGCTCGTGCAATGGGCCACGAAAATGACGGCCCAAAACTCCGAAATGGAAATGGTTGATTCCAATATTTCAAGAGAAGGAATAAGTGAAGATAATGTGAAGGAGTACTTTAGGATTGCTTGTATGTGCACGAGTGAATTACAGAAAGATAGACCTGTGATGCAACGGGTTGTGGAATTGTTCGAGAAGATGACCGTATAG 1125 0.5049 MDHIFLAVIAAVASFFVVTLIFAAIILVCNSNSNTNTPPPQRQNRARTQNRTLPELSSVVVDGSWSFNPDVQITWDEITRATENFSPDLIIGDGSFGLVYKARLSNSLVVAIKKLSPDAFQGFREFRAEMETLTKLRHRNIVKILGYWAAGQERMLFYEFMERGNLDEWLHDPTIPSSSGYDDVSMPWVPLSWELRLKIIRGIANGLSYLHGLEKPIIHRDIKASNILLDSHFEAHIADFGLARRIDTSNSHVSTQFAGTMGYMPPEYRNGVNVANVKVDVYSFGVLMLETATGQRPNLSVKYEDRDIGLVQWATKMTAQNSEMEMVDSNISREGISEDNVKEYFRIACMCTSELQKDRPVMQRVVELFEKMTV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2134 374 Gene3D Transferase(Phosphotransferase) domain 1 161 374 - -
Lele08g2134 374 ProSiteProfiles Protein kinase domain profile. 85 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2134 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lele08g2134 374 FunFam Phytosulfokine receptor 2 45 160 - -
Lele08g2134 374 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Lele08g2134 374 SUPERFAMILY Protein kinase-like (PK-like) 68 369 IPR011009 -
Lele08g2134 374 Pfam Protein tyrosine and serine/threonine kinase 91 368 IPR001245 GO:0004672|GO:0006468
Lele08g2134 374 Gene3D Phosphorylase Kinase; domain 1 47 160 - -
Lele08g2134 374 CDD STKc_IRAK 91 372 - -
Lele08g2134 374 SMART serkin_6 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g2134 374 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 371 - -
Lele08g2134 374 FunFam Phytosulfokine receptor 2 161 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2134 Lele-ChrLele08 26022386 26023510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2134 69 372 Receptor kinase-like Gene Family AT5G07280 44.262 8.17e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lele08g2134 PK_Tyr_Ser-Thr 1e-43 CL0016