Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele08g2133 | ATGGCCACAGTACCAGGGCAGCTCGTGTGGGAAATCGTGAAGAAGAACAACTCTTTTTTGGTGAAGGAGTTTGGTAGGGAGACTCAAAGCGTGCAGTTCAGTAAAGAGAGCAACAATCTCTACAACCTTAACTCTTTCAAGTTCTTTGGACCTTTCGAAAATGTAAATTCATTCTCGTTTGCAACACATTTCATTTTCCCTGTTCTAGGATCTAAATCAGATAAAGGGCATGTGATTTGTGATTGA | 246 | 0.4065 | MATVPGQLVWEIVKKNNSFLVKEFGRETQSVQFSKESNNLYNLNSFKFFGPFENVNSFSFATHFIFPVLGSKSDKGHVICD | 81 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele08g2133 | 81 | Pfam | Ribosomal L28e protein family | 8 | 50 | IPR029004 | - | |
| Lele08g2133 | 81 | PANTHER | 60S RIBOSOMAL PROTEIN L28 | 1 | 50 | IPR002672 | GO:0003735|GO:0005840|GO:0006412 | |
| Lele08g2133 | 81 | Gene3D | - | 1 | 57 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele08g2133 | Lele-ChrLele08 | 26017397 | 26018474 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele08g2133 | 1 | 50 | Cytoplasmic Ribosomal Protein Gene Family | AT4G29410 | 74.000 | 3.86e-22 | 81.6 |