Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2131 ATGGTTTCGGCGCTGACGCATGTGGTGTCAGGGTCTGGGGGTCAGGCACGCACCGAAAGGAACCTTGTGACCTCACCTCTTGGCCAACCTTCTCCTCCTTCTTCAGTTTTGTCGCCATATTTGTCGTCTTCTTCTTCTTCTTCTTCATCATCTTCTTCGAATGCTTCAGGCTCTGTTTTGAGCTCTGCTTCTGGTTCTACCGCTTCCTGGGTTGGCCACAAACGAGCACGGGACCAACACAGCTCTGTCTTTGGATCTTTCAGTGACTTCAAAGTTCCTTCTCAGGGACAATCATCTTCAGGGGCAGATGAGGGGACGAATGTGGCGGCCAGTGCAGTGGTGGAGACGGTGGCGGCGGCTGAGGAAAGCGGAGAGAGGAGGAGGTACAGAGGAGTGAGACAGAGGCCATGGGGGAAATGGGCGGCGGAAATTCGTGATCCTCACAAGGCGGCAAGAGTCTGGCTTGGTACATTCGATACGGCGGAAGCTGCTGCCAGAGCTTACGATGAAGCTGCACTGAGATTCCGAGGGAACAGAGCAAAATTGAATTTCCCGGAAAATGTCAGAGTTGTGCCCCCTGCTCACAACTTTCCGGCCACTCGACTCGCCGTATCAGATTCCCCGGTGACGCATTTCCAACACCAGACTACTAATCTTCCTCCTCCACTTCCTCCCCCGCAGCCGCCGTTTTCGCAGTCACCGTCTTTTCAGTCGCAATCAGAATTGATCAGAGATTATTGGGAATATTCTCAGCTTCTTCAAAGCTCCGATGACTTCCAACAACAGCAACAGCAACAGCAACAACATTCGAATTTGCTGCAACAATGGATCCATAATTCCCAATTGGCAGCGCTTCAATCGTCTTCTTTGTTATTATCATCGTCACCCCTGTTTTCTTCTTCATCACCAACAGCATTCTCACCTTCCAGCCAGCTCTCCTCTGCTTCATACCCCCTGTTTTCTAGTCAGCAAACAGGTTACTTCCGACCACCGGGAAACCAACAGCACGGTGGTGGTGGCGGCAGCGGCAACATCGGCAGTGGCTCAGACTTTCCGACGTCAACTTGGTCAGATACCAGTGGCTATCCTCCTCCATCCGGTTCAAGCTGA 1110 0.5225 MVSALTHVVSGSGGQARTERNLVTSPLGQPSPPSSVLSPYLSSSSSSSSSSSSNASGSVLSSASGSTASWVGHKRARDQHSSVFGSFSDFKVPSQGQSSSGADEGTNVAASAVVETVAAAEESGERRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRVVPPAHNFPATRLAVSDSPVTHFQHQTTNLPPPLPPPQPPFSQSPSFQSQSELIRDYWEYSQLLQSSDDFQQQQQQQQQHSNLLQQWIHNSQLAALQSSSLLLSSSPLFSSSSPTAFSPSSQLSSASYPLFSSQQTGYFRPPGNQQHGGGGGSGNIGSGSDFPTSTWSDTSGYPPPSGSS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2131 369 FunFam Ethylene-responsive transcription factor 2 127 186 - -
Lele08g2131 369 ProSiteProfiles AP2/ERF domain profile. 128 185 IPR001471 GO:0003700|GO:0006355
Lele08g2131 369 PANTHER DNA-BINDING DOMAIN 58 275 IPR044808 GO:0003700|GO:0009873
Lele08g2131 369 MobiDBLite consensus disorder prediction 323 369 - -
Lele08g2131 369 MobiDBLite consensus disorder prediction 1 69 - -
Lele08g2131 369 MobiDBLite consensus disorder prediction 207 235 - -
Lele08g2131 369 CDD AP2 136 187 IPR001471 GO:0003700|GO:0006355
Lele08g2131 369 SUPERFAMILY DNA-binding domain 128 186 IPR016177 GO:0003677
Lele08g2131 369 Pfam AP2 domain 128 177 IPR001471 GO:0003700|GO:0006355
Lele08g2131 369 MobiDBLite consensus disorder prediction 1 75 - -
Lele08g2131 369 SMART rav1_2 128 191 IPR001471 GO:0003700|GO:0006355
Lele08g2131 369 Gene3D AP2/ERF domain 127 187 IPR036955 GO:0003700|GO:0006355
Lele08g2131 369 MobiDBLite consensus disorder prediction 218 232 - -
Lele08g2131 369 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Lele08g2131 369 PRINTS Ethylene responsive element binding protein signature 129 140 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2131 Lele-ChrLele08 25896719 25897952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2131 116 192 AP2-EREBP Transcription Factor Family AT2G33710 73.077 1.67e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele08g2131 AP2 6.9e-15 CL0081