Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2127 ATGGTAAGGTTGACAAGCGAGGCAACAAAAGGAGTACAAGAACACAACTATGAGGATGAAAACCACATCAATCACCAAAAATGCAGTGGCCAACCAGCTAAGCTTGCTCACTACAAGGAGAGGAGAAGGATTTCGCACAGGAAGTTCGAGGACGCCAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCATAGGGGAAAAGAACTTCACAAGAAGAAAACCTGTGAACCGGTTACAATTATTGAGACACCGCAAATGGTTATTGTTGGAGTTGTGGGGTTCTACAAGAATTGGTGTAAGTCCAAGAAGAAGGCTTTCCTGAAGTACCCCAAGCAGTATGAATCTGAAGAAGGCAAGATAAGCATTCAGGCTCAGCTTGAGAAAATGAAGAAGTATACTTCAGTTGTTTGTGTTTTGGCTCACACCCAGGTCAATGGTGGTACAATTGCACAGAAGGTGGACTATGCATACAATTTCTTTGAGAAAGAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATCGATCTCATCGGTGCTACAAAAGGTAAAGGGTACAATGGTATTGTCACTCGTTGGGGTGTGACCCTTCCCTGTAAGACTCACATGGGTTTGAGGAAAGTTACATGTATTGGTGCTTGGCATCCTGCCAGAGTTTCTTTCACAGTTGCCAGAGCTAGTCAGAATGGATACCACCACCGAATAGAGTTGAACAAGAAGGACATAACTCCATTTGGTGGCTTCCCTCACTATGGTATTGTGAAGGATGACTATTTGATGATCAAGGGATGCTATGTGGTTCCCAAGAAAAGGTTATCACATTGCGCCAATCCCTCCTTTAGCAGACTTCTCGTGTTGCTCTGGAGGAGATCAAACTCAAGTTTATCGAAACATCTTCCAAGTTTGGCCATGGCCGCTCAATTGTTCATGAATTTTGCTCAGATGCGTTTGCAAGTTCTGGAACTCTCTCCTCAAGGCCGTTTCATACCCTCTCGTCTCTCCAACTTCATCAAACATCACACTTACCATAACTCTGTGATTCTCGTCCTCTCTTTTTCCGGTCCTTCATCTAATGGATTGAACATCGGAGACGAGGTTTTCCGATCGGTGCCAATGCTAGATGAAGTTGATATGAGAAAACCTAGGAATCTAGTTGTGTGGGGAGATTCAATCGCTTTGATTTACTGTATCGAGATTCGAAGCTTGAACTTGTCGTGGATTGACATATGGGTGACGAATAATAATAGTAATGGATTTGGTAGTGGTGAGGCTCATCAGGTTTCATGGACCAAAATGCACAGCATAGCACCAAAAGGTTTGTTAGAAGATCCTAAGCCGTTGATTTTTTGGAAAGGTAATGAGCTTTTGTTGGAAACTTATGGTGGAGAGATTAAGTCTTTTAGGCCTTGTTTGGTTCGAAGACATGGAGGGAAGGAAAGGGAAGGGAAGTGA 1467 0.439 MVRLTSEATKGVQEHNYEDENHINHQKCSGQPAKLAHYKERRRISHRKFEDARHGSLGFLPRKRAARHRGKELHKKKTCEPVTIIETPQMVIVGVVGFYKNWCKSKKKAFLKYPKQYESEEGKISIQAQLEKMKKYTSVVCVLAHTQVNGGTIAQKVDYAYNFFEKEVPVDAVFQKDEMIDLIGATKGKGYNGIVTRWGVTLPCKTHMGLRKVTCIGAWHPARVSFTVARASQNGYHHRIELNKKDITPFGGFPHYGIVKDDYLMIKGCYVVPKKRLSHCANPSFSRLLVLLWRRSNSSLSKHLPSLAMAAQLFMNFAQMRLQVLELSPQGRFIPSRLSNFIKHHTYHNSVILVLSFSGPSSNGLNIGDEVFRSVPMLDEVDMRKPRNLVVWGDSIALIYCIEIRSLNLSWIDIWVTNNNSNGFGSGEAHQVSWTKMHSIAPKGLLEDPKPLIFWKGNELLLETYGGEIKSFRPCLVRRHGGKEREGK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2127 488 ProSitePatterns Ribosomal protein L3 signature. 174 197 IPR019926 -
Lele08g2127 488 Gene3D Translation factors 233 286 - -
Lele08g2127 488 SUPERFAMILY Translation proteins 47 276 IPR009000 -
Lele08g2127 488 Pfam Ribosomal protein L3 45 71 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele08g2127 488 Pfam Ribosomal protein L3 98 277 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele08g2127 488 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 70 288 IPR045077 GO:0003735|GO:0005840|GO:0006412
Lele08g2127 488 Gene3D Ribosomal protein L3, domain 3 166 232 IPR044892 -
Lele08g2127 488 Gene3D - 95 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2127 Lele-ChrLele08 25802021 25810118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2127 44 277 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 56.047 7.81e-113 337