Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2106 ATGGAGAATAACGCAATGTTGCCTCTCCTTTCATCAGGAAATCAGGTTCTTACATTGATGGTTAACACAATGAAGCCCATCCAAAAAGAAGGAGAAAAGAAATTTTTGGAGAAATCTACACTAGAGATCACTGAACCCTCAATGATCAAACCAACCATCTCTGAGTTCAGTGGGGTGGACACTGATGCACACTTGGCTAATGTGATTGCTAGCTTTCTCCAAACTATAAATCATAGGAGAAATCACTTCTTAGGGTATCCAACTAATCAAGACTTCGACTATGATGCATTGGTGCAATTGCTACGTTTCTTCTTGAACAATATGGGTGATCCATTTATTGGCAGCAGCTTCTCTCTCAATTCAAATCCGTTTGAGCTGTGTGTACTAGATTGGTTTGCCAAACTTTGGGAAATAGGGAAGAATGAGTATTGGGGATATGTTACAAATGGTGGAACTGAAGGAAATTTTCATGGGATTTTAGTAGGGAGGGAAGTATTTCCCGATGGAATTCTTTACACATCACGGGACTCTCATTATTCAGTGTTAAAAGCGGCAAGACTTTTTAGAGTCAAGTGTGTGGTAATTGGGACTCTAATCTCAGGTGAGATTGACTATAATGAACTGAAATATTCAATTCTTAACAACAAGGACAAGCCAGCCATCATCAACCTAAATATAGGGACAACTATAAAAGGTGGCATTGATGATGTTGATCTTGTACTACAAATTCTTGAAGATTGTGGTTTTACTGAAGATCGGTTCTACATTCATTGCGATGCAGCTTTATTTGGACTGATGCTCCCATTTCTTAAAGGAGCACCAAAGATTACTTTCAAGAAACCTATTGGAAGTATAACTGTCTCAGGCCATAAGTTCCTCGGATGCCCTATTCCTTGTAGCATTATAATAACTCGTTTAAAATACATTGACCTTCTGTCTAAAGAAGTTGAATACATCTCTTCAAGAGACACGACTATCTCTGGAAGCCGAGGAGGTCATGCATCCATCTTCCTTTGGTATGCTCTCAACAAGAAAGGCTCCAACGGCCTCCAGAAGGAAGCCGAAGAGTGCAACGAGAAGGCAATTTACCTTCAGATTCGCCTGAGAGACATCGGCATCGGAGCCATGCTGAACAAGTTTAGCAACACCGTGGTGTTCGAGAGGCCCCTCGATGATGCATTTTCTCATAAGTGGAGCTTGTCTAATGAAGGCAATGTATCACATGTGGTAGTGATGCCACATGTCACTTTGAAGATGTTGGATTCCTTTGTGAGTGAATTTGCCAAGAATCGATCAATTTGGTACAAAGATAATAGCGGAAAGAAGCCTCCTTGTCTTGGTGAGGAGATTGGTGCTAAGAACTGTGCTTGTTTAGTCCACAAGAAGTTGATCTCGTTGTGA 1401 0.4083 MENNAMLPLLSSGNQVLTLMVNTMKPIQKEGEKKFLEKSTLEITEPSMIKPTISEFSGVDTDAHLANVIASFLQTINHRRNHFLGYPTNQDFDYDALVQLLRFFLNNMGDPFIGSSFSLNSNPFELCVLDWFAKLWEIGKNEYWGYVTNGGTEGNFHGILVGREVFPDGILYTSRDSHYSVLKAARLFRVKCVVIGTLISGEIDYNELKYSILNNKDKPAIINLNIGTTIKGGIDDVDLVLQILEDCGFTEDRFYIHCDAALFGLMLPFLKGAPKITFKKPIGSITVSGHKFLGCPIPCSIIITRLKYIDLLSKEVEYISSRDTTISGSRGGHASIFLWYALNKKGSNGLQKEAEECNEKAIYLQIRLRDIGIGAMLNKFSNTVVFERPLDDAFSHKWSLSNEGNVSHVVVMPHVTLKMLDSFVSEFAKNRSIWYKDNSGKKPPCLGEEIGAKNCACLVHKKLISL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2106 466 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 284 305 IPR021115 GO:0016831
Lele08g2106 466 SUPERFAMILY PLP-dependent transferases 32 429 IPR015424 -
Lele08g2106 466 PANTHER - 28 461 - -
Lele08g2106 466 Pfam Pyridoxal-dependent decarboxylase conserved domain 170 370 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele08g2106 466 Gene3D - 116 331 IPR015421 GO:0003824
Lele08g2106 466 Gene3D Aspartate Aminotransferase, domain 1 334 431 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2106 Lele-ChrLele08 24042379 24045936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2106 226 410 Calmodulin-binding Proteins AT2G02010 26.804 3.17e-08 53.9