Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2103 ATGAGAATGGAGGACCAAGAGGAAGACAGGGGTGGACGCTGCGGGGGAGAGGAGAGAGAGATTTGGTTGCCACGTCACCTTGTTACCTTTCATTTTTGGATTGAGCAGGAGCTTTTGAGGCTGGTGATTGATGGCAAGGAATGTAAGGAAACTTTTGAAGAGTTTCCTTATTACTTAAGCGAAAGAACATGTGAGTTATTGACTAGTGCTGCATTTGTTCATTTAAAACAACTTCACTTTTCCAAACACACCCGTAACCTTTCATCGGCAAGCAGGGCAATTCTGCTATCTGGGCCTGCAGAACTTTACCTGCAAATACTTGCCAAGGCCTTAGCGCATCACTTTGAGTCAAAGTTGCTACTGCTAGATATTGTTGACTTCTCTTTCAAGATGCAAAGCAAATATGGATGTGCAAGAAAAGAATCATCTTTTCAAAGGTCCTTATCTGATGCAACTCTCGAGCGAGTGTCCAGCTTTTTTGGTTCCTTTTCGGTTCTCCCTTCAACTGGAAAAACCAAAGGCACTTTGCAAACACATAGTAATAATACTGGAAGTTCCACTACATCTTCAAAACTTAGTAGGAATTCCTCTACTGCATCTGACATGAGTAGCACTGCCTCCCAATGTGGTCCAACAAATTCAGGTCCCTTGAAGCACTCAAGCAGCTTGTGTTTTGATGAAAAACTCTTTCTACAATTGCTTTACAAGGTCTTGGATCCAGAATACCGAAATGGGAAGCTAGTAATATCATCTGAGAGTTTGTCCCATGGTTTGAATCTATTTCAAGAAGGCAAAAGTACTGCTGAAGATACCCTGAAGCTGGAGGCTAATGGAAACAAGGACTCAGCCGGTGGAGAGTGCAATGGTGCAAAAAATGAGGAAGTTCCTCCTGACAATGAGTTTGAGAAGCGCATTAGACCAGTGGTCATCCCTGCAAATGAGATAGGAGTTACATTTGCAGATATTGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGCTTTATCAATGTCTCAATGTCTACCATCACTTCAAAATGGCCATTTGACCTTGATGAAGCAATCATTCGACGGTTTGAGCGAAGAATCATGGTTGGCCTTCCATCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTACTAGCTAAGGAAAAGACTGAAAATTTAGACTTCAAAGAGCTTGCTGTCATGACAGAAGGATACAGTGGAAGTGATCTTAAGAATTTGTGCACAGCTGCTGCTTATCAACCTGTTAGGGAGCTCATAAAGCAGGAGAGATTGAAAAATATGGAAAAGAATAAAAAAGCAGCAGAAGAACAAAGCTCAGAGGATGCTTCAGATACTAAGGAGGATGGAGGAGAAGAGAAAGTAATTACCTTGAGGGATTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTTGCTGCAAGTTTTGCTGCTGAAGGATCAATAATGGCTGAGCTGAAGCAGTGGAATGAGCTATATGGAGAAGGAGGTTCAAGAAAGAAACAACAACTCACTTACTTCCTTTAG 1554 0.4196 MRMEDQEEDRGGRCGGEEREIWLPRHLVTFHFWIEQELLRLVIDGKECKETFEEFPYYLSERTCELLTSAAFVHLKQLHFSKHTRNLSSASRAILLSGPAELYLQILAKALAHHFESKLLLLDIVDFSFKMQSKYGCARKESSFQRSLSDATLERVSSFFGSFSVLPSTGKTKGTLQTHSNNTGSSTTSSKLSRNSSTASDMSSTASQCGPTNSGPLKHSSSLCFDEKLFLQLLYKVLDPEYRNGKLVISSESLSHGLNLFQEGKSTAEDTLKLEANGNKDSAGGECNGAKNEEVPPDNEFEKRIRPVVIPANEIGVTFADIGTGKTMLAKAIANEAGASFINVSMSTITSKWPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKTENLDFKELAVMTEGYSGSDLKNLCTAAAYQPVRELIKQERLKNMEKNKKAAEEQSSEDASDTKEDGGEEKVITLRDLNMEDMRQAKSQVAASFAAEGSIMAELKQWNELYGEGGSRKKQQLTYFL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2103 517 CDD AAA 323 371 - -
Lele08g2103 517 Gene3D - 375 480 - -
Lele08g2103 517 Pfam AAA+ lid domain 394 437 IPR041569 -
Lele08g2103 517 Gene3D - 355 374 IPR027417 -
Lele08g2103 517 MobiDBLite consensus disorder prediction 171 213 - -
Lele08g2103 517 Pfam ATPase family associated with various cellular activities (AAA) 322 367 IPR003959 GO:0005524|GO:0016887
Lele08g2103 517 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 323 353 - -
Lele08g2103 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 420 IPR027417 -
Lele08g2103 517 MobiDBLite consensus disorder prediction 277 297 - -
Lele08g2103 517 Coils Coil 426 453 - -
Lele08g2103 517 Gene3D - 323 353 IPR027417 -
Lele08g2103 517 MobiDBLite consensus disorder prediction 437 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2103 Lele-ChrLele08 23928586 23936492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2103 342 433 Calmodulin-binding Proteins AT3G56690 34.737 2.32e-08 55.1