Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2096 ATGCTGGGGGACTCATCGTCGGCTGTATTGGGTGGTGGCGGAGGAGGTGGCGGTGGTAACTCTTCTGATGCAGTGACACCGACAGTCGTGGCTGCTGCAGCAGCAGTAACGTGTCCCCATGATGGTGGCGAGTCGACCGCGGCGGCAGCGGCAGCTGGATCGAATTCCGGGGAGGAAGATATGAGGGGAAGAGGGGAAGAAGGTGACCGGAGCTTTGGCGGCAAACGGTGGCCCCGGCAAGAGACTTTTGCGCTCTTGAAAATGCGCTCAGATATGGACGTGGCGTTTCGAGATGCTAGCGTTAAAGGTCCTCTCTGGGAAGAAGTTTCCAGTAAGATGGCAGAGCATGGGTATCACAGAAGCGCCAAGAAATGCAAAGAGAAATTCGAGAACGTGTACAAATACCACAAGAGAACAAAAGATGGCCGAACTGGGAAATCTGAAGGCAAAACGTATCGTTTCTTTGATCAATTAGAAGCTCTCGATCATCATAACCATCCTCCTCTTCTTACAGTTCAATCCTCATCATCACAGCCACCGCAAGCACCACCGTCAAAGCCACCTTCGCAGTTACTAGCAATACCTGCAACACCAGTTTCAGTGGCGGCGATGACTCCATTATCATCCACAAATGTTAATCATCCTTCTCATCTCTCTACTGTTCCATCAACGATCACACCTCAACCCAATGTTCTCATTCCACCTATCAACCCCGCTTCTTCCATAATTAATAATCCTCCTTCCTACGATATTTTCCAACCACCAGCGCCGCCGCCAACATCAACCGCAAACCCTATCCAATCTTCTTTCCCCGCTGACCTCTTGTCCAATTCTCCGTCTTCCTCGAACACCTCCGATAAATCGATAGAGCGGCGCCAACGACGGAAGATGCAGTGGAAGGACTTCTTTGGAAGGCTGACGAAGGAGTTGATAGAGAAACAGGAGCAAATGCAGAAGAGGTTATTGGAGGCCATTGAGAAGAGAGAACATGAGAGGATGGTTCGTGAAGAAGCTTGGAGAATGCAGGAGATGGCGAGGATTAATCGAGAATGTGAAATATTGGCACAGGAAAGATCTAGAGCGGCTGCCAAGGACGCTGCTGTAATGGCATTATTGCAGAAGATCACTGAACAGAAAGATCTCGGCATCCCACTGAATAATATCAACATTTCTCCTCCTCCACCACCACTGATGGCACAACCGGTTCCGGCTCCGACTCCGGCCCCGGCTCATCCAGCAGCTCAGCCACAGCCGACCTCAGTCACAAACATGGAGATTGTAGCAATCGATAATAGTAACTATAATGGGGAGAATTTGATGACACCGAGTTCGTCGAGGTGGCCGAAAGTGGAGGTTCAGGCATTGATAAAGCTACGAACAAGCAGGGACGAGAAGTACCAAGAGAATGGACCAAAAGGGCCGCTGTGGGAGGAGATCTCGGCGGCGATGCGGAGGCTCGGGTACAACAGAAACGCTAAGAAGTGCAAGGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAGGCGAAGGAGAGCCACAAGAAGAGGCCGAAAGATGCTAAGACCTGTCCGTATTTCCACCAGCTAGATGCTCTATACAGGGAGAAGAACAAGCTTGAGAAGATCAATTCTCCTCCTCCGCCGTCGTCAGCCACCACGACGAACCATAATCTGAATCCGGCAGATAATAATAGCACAATACCAACATCAGCGCCGCTGATGGTTCAGCCGGAGCAGCAATGGCATCCGCAGCAAGAGGAAAACAACAATAACAATGCAGATTTGGAGGAGGAAGAAGAAGAAGACATGGACGAAGAGAAGGATATTGAAGACGAAGATGACGAAGGAGAAGAAGAGGAAGGAGGTGGCAATTATGAGATAGTAGTGAGCAAGCCAGCTTCAGCGAGTTCAGCTTAG 1917 0.5003 MLGDSSSAVLGGGGGGGGGNSSDAVTPTVVAAAAAVTCPHDGGESTAAAAAAGSNSGEEDMRGRGEEGDRSFGGKRWPRQETFALLKMRSDMDVAFRDASVKGPLWEEVSSKMAEHGYHRSAKKCKEKFENVYKYHKRTKDGRTGKSEGKTYRFFDQLEALDHHNHPPLLTVQSSSSQPPQAPPSKPPSQLLAIPATPVSVAAMTPLSSTNVNHPSHLSTVPSTITPQPNVLIPPINPASSIINNPPSYDIFQPPAPPPTSTANPIQSSFPADLLSNSPSSSNTSDKSIERRQRRKMQWKDFFGRLTKELIEKQEQMQKRLLEAIEKREHERMVREEAWRMQEMARINRECEILAQERSRAAAKDAAVMALLQKITEQKDLGIPLNNINISPPPPPLMAQPVPAPTPAPAHPAAQPQPTSVTNMEIVAIDNSNYNGENLMTPSSSRWPKVEVQALIKLRTSRDEKYQENGPKGPLWEEISAAMRRLGYNRNAKKCKEKWENINKYFKKAKESHKKRPKDAKTCPYFHQLDALYREKNKLEKINSPPPPSSATTTNHNLNPADNNSTIPTSAPLMVQPEQQWHPQQEENNNNNADLEEEEEEDMDEEKDIEDEDDEGEEEEGGGNYEIVVSKPASASSA 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2096 638 MobiDBLite consensus disorder prediction 591 622 - -
Lele08g2096 638 Coils Coil 585 615 - -
Lele08g2096 638 FunFam Trihelix transcription factor GT-2 447 508 - -
Lele08g2096 638 MobiDBLite consensus disorder prediction 39 77 - -
Lele08g2096 638 ProSiteProfiles Myb-like domain profile. 76 133 IPR001005 -
Lele08g2096 638 MobiDBLite consensus disorder prediction 1 24 - -
Lele08g2096 638 MobiDBLite consensus disorder prediction 543 590 - -
Lele08g2096 638 CDD GT1 445 510 - -
Lele08g2096 638 MobiDBLite consensus disorder prediction 167 192 - -
Lele08g2096 638 MobiDBLite consensus disorder prediction 265 286 - -
Lele08g2096 638 Pfam Myb/SANT-like DNA-binding domain 445 532 IPR044822 -
Lele08g2096 638 Pfam Myb/SANT-like DNA-binding domain 75 161 IPR044822 -
Lele08g2096 638 Coils Coil 344 364 - -
Lele08g2096 638 Gene3D - 447 509 - -
Lele08g2096 638 Gene3D - 77 138 - -
Lele08g2096 638 MobiDBLite consensus disorder prediction 540 638 - -
Lele08g2096 638 Coils Coil 307 331 - -
Lele08g2096 638 SMART sant 443 505 IPR001005 -
Lele08g2096 638 SMART sant 73 135 IPR001005 -
Lele08g2096 638 MobiDBLite consensus disorder prediction 393 418 - -
Lele08g2096 638 ProSiteProfiles Myb-like domain profile. 445 503 IPR001005 -
Lele08g2096 638 MobiDBLite consensus disorder prediction 244 293 - -
Lele08g2096 638 MobiDBLite consensus disorder prediction 59 76 - -
Lele08g2096 638 PANTHER FI21293P1 46 606 - -
Lele08g2096 638 FunFam Trihelix transcription factor GT-2 77 138 - -
Lele08g2096 638 MobiDBLite consensus disorder prediction 393 414 - -
Lele08g2096 638 CDD GT1 75 140 - -
Lele08g2096 638 MobiDBLite consensus disorder prediction 250 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2096 Lele-ChrLele08 21016246 21019068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2096 66 581 Trihelix Transcription Factor Family AT1G76880 52.273 1.92e-156 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele08g2096 Myb_DNA-bind_4 1.7e-21 CL0123