Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2094 ATGGAGGATTTTTGGAGAATCTTTTGTGAAGAATCAAGTTGTTCAGAAAGCGGGGGAAAACATTGCAGTTATGATTTTGATCTTCTGAAAGATCCTTCAACATGCATGAACCATTTCATGATCATCTGCCTCAATGTGTTACTGCTGATTTTGCTTTTATTCACAATAATACTTAAGTCATCATCAACAAAAACATTTCATGGTTCTATTCAAGTACAAATTAGGTTCTCCAATTTGCAGGTAGCTTCTGCAATAGTGAGTGGCTGTCTTGGTTTAGTTCATTTGGGCTTTGGCATTTGGAGTTTAGAGGAGAAATTGAGGAAAACTGACACTTCTTTTCCTATTCATTGGTGGATTCTAGAGTTTTCTCAAGGAATCACATGGTTGTGTGTGGGTTTGACAATAAGTCTCAAGTTGAGAGAACTTTCAAAACCATGGTCAAAACTAGTATCTATTTTGGTCTTCTTAATTTCTGGTATCTTTTGTGCTATTTCCATTTTTTTCGTCGTCGGTGGAAGTGAAGTGTCCATTAAGATAGCTTTAGATGTTTTATCCTTTCCTGGAGCAATTTTGTTGCTCATATGCTCATATAAGGGACATAAGTACGATGAAAGAAGTATCGGTGAAAGCCTTTATGCTCCTTTAAATGGTGAGGATAAAACTAGTTCTGCCAATTATGTAACCCCATTTGCAGAAGCTGGATTCTTTAGCAAGATGTCGTTTTGGTGGTTGAATACATTGATGAAAATGGGAAAGGAGAAAGCTATCCAAGAAGAAGATATCCCGAAATTGCGAGAGGAAGATCAAGCTGAAAGCTGTTATTTGGTGTTTCTTGATCAGTTGAATAGAATAAAACAAAAAGAACCATCATCACAACCATCTGTTTTCTGGACAGTAATTATGTGCCATTGGAAAGATATCTTCGTATCTGGATTTTTCGCATTGCTTAAGGTACTCACTATCTCAGCTGGTCCACTGCTTCTAAATTCCTTTATATTGGTTGCTGAGGGTAAAGAAAGTTTCAAATATGAAGGTTACATATTGGCCATAACACTTTTCTTCACAAAGATCTTAGAATCTATATCACAAAGGCAATGGTACTTCCGCAGCAGACTCATCGGTTTACGAGTTAGATCACTACTTACTGCAGCAATTTATAAAAAGCAATTGAGGCTATCTAATGCTTCAAGGCTGATTCATTCAGGTGGGGAAGTTATGAATTATGCAACTGTAGATGCTTATAGAATTGGAGAATTTCCCTTTTGGTTTCACCAAACTTGGACTACAAGTATTCAATTATGTATTGCACTTGTAATTCTTTTTAATGCTGTGGGGCTTGCAACACTTGCTTCCTTGGTGGTTATAGTTCTCACTGTTCTTTGCAATGCTCCATTGGCAAAGGTACAACATAAGTTTCAGACCAAACTTATGGTGGCACAAGATGAGAGATTGAAGGCTAGTTCTGAGGCTCTTGTGAATATGAAAGTACTGAAGCTATATGCATGGGAAACCCATTTTAAGAATGCTATTGAACGCTTGAGGAAACTTGAGCTCAAGTTTTTGACTTCTGTGCAGTTAAGAAGGGCATATAATACCTTTCTCTTTTGGTCTTCACCTGTTTTGGTCTCTGCTGCTACTTTTGGTGCATGTTACTTCCTAAAAGTCCCTTTACATGCAAATAATGTTTTCACTTTTGTTGCAACTTTACGCCTCGTTCAAGATCCGATTAGAACGATCCCTGATGTTATAGGGGTGGTCATTCAAGCTAAAGTAGCATTTGCTCGGATCGTGAAATTCCTCGAGGCACCAGAATTGCAGAGTGCAAATGTTAGAAAGAAGAGCTCAAATGGAAGTCTTAATGGTTCTATTCACATTAATTCCGCTGACTTTTCATGGGAAGATAATGATTCTAAGCCCACTTTAAGAAATATAAATCTAGAGGTTAAACCTGGCCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCTGGCAAATCAACCTTATTGGCTGCAATTCTTGGAGAAGTTCCCAAAACTCATGGAAATATTGAAGTCCACGGGAAGTTTGCTTATGTTTCTCAAACAGCATGGATTCAAACAGGCACAATAAGGGAAAATATATTGTTTGGCTCAGCCCTGGATTCTCAAAGGTACCAAGAAACACTTGAAAGGTCATCATTAGTGAAAGATCTTGAGTTGTTTCCCTATGGTGATCTCACAGAAATAGGGGAGAGAGGTGTGAACCTTAGTGGAGGCCAAAAACAGCGAATTCAACTCGCTCGTGCTCTTTATCAGAATGCTGATATATATCTGTTAGATGATCCATTCAGTGCTGTTGATGCACATACAGCCACAAACTTGTTTAATGAATATGTCATGGAAGCACTTAGAGAAAAGACAGTCATGCTTGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTATTTCGCTCATGTGTGATGGGGAAATTCTAGAAGCTGCCTCTTATCAGTATCTTCTATCTTCAAGCCAAGACTTTCAAAACCTTGTTCATGCTCACAAGGAGACCGCTGGTTCTGAAAGGCTTCCTGATGTAACTTCTTCTCACACACATGTAAATCCCACCAAGGAGATTAACAAGTCATATTCAGAGAAGCAGCTGAAGGATACAAAAGGCGACCAATTAATTAAGCAAGAAGAAAGAGAAATTGGAGACACAGGGCTAAAGCCTTACTTGCAATATCTGAATCAAAACAAGGGCTACCTATACTTCTGTATTTCTGCACTTATGCACCTTGCATTTGTGATTGGTCAAGTACTACAAAACACATGGATGGCTGCTAATGTTGACAATCCTCGTGTTAGCACATTGAAATTGATCGCGGTGTACTTGTTGATTGGAGTTGTTTCAACCTTTTTCTTGCTGATTAGAACTCTGGGAATAGTTGCTTTAGGCATTCAATCATCAAAGTCTTTGTTTTCACAGCTACTGAACTCGCTTTTCCGTGCGCCCATGTCATTTTATGACTCCACACCTTTGGGAAGGATACTTAGTAGGGTCTCATCAGATTTGAGCATTGTCGATCTCGATGTTCCATTCAACCTCATGTTTGCCGTTGGAGCCACCACAAATTGTTATGCAAATCTTGTTGTTTTAGCGGTTGTTACTTGGCAAGTCTTGTTTGTCTCTATACCAATGGTTTATATAACAATTTGTCTGCAGAGATACTACTTTGCCTCTGCGAAAGAGTTGATGCGATTGAATGGCACGACAAAATCCTATGTAGCTAATCATCTAGCAGAATCTGTTGCTGGTTCTATGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTCTTCGCCAAGAATCTTGATTTAATCGATGTCAATGCCTCCCCTTTCTTCCATAACTTTACTGCGAATGAGTGGTTGATTCAACGTTTAGAAGCAGTTAGCGCGTGTGTTCTTGTCTCCGCGGCACTTTGCATGGTAGTACTTCCACCTGGGACTTTCTCCTCTGGATTTATTGGCATGGCCATTTCTTATGGGCTTTCATTAAATGCATCCCTTGTATTCTCAATTCAAAACCAATGCACAACTGCAAACTATATAATATCAGTAGAGAGGTTGAATCAATACATGCATATACCAAGTGAAGCTCCAGAAGTCATAGAAGGAAATCGCCCTCCTGCGAATTGGCCCATGGTTGGAAAAGTAGAAATAAATAATCTGCAGATAAGGTATAGGCCTGATTCACCTCTAGTACTTCGAGGAATCACATGCACATTTGAAGGAGGGCACAAAATTGGCATTGTTGGCAGAACAGGTAGTGGAAAGTCCACTCTCATTGGTGCTTTGTTTCGCCTCGTGGAGCCGGCCGGCGGAAAGATAATTGTCGATGGCATAGACATTTGTACTATTGGCCTCCATGATTTGAGATCACGTTTCGGCATCATACCACAAGATCCTACACTTTTTAATGGCACGGTTAGATATAACCTAGACCCCTTGTCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGAAAGTGTCAATTGCTAGAGGCGGTTCAAGAGAAAGAAGGCGGCTTAGACTCATTAGTTGTGGAAGATGGATCAAATTGGAGCACGGGACAGAGACAACTATTTTGTTTAGGACGAGCCCTTCTATGGAGAAGTCGGGTTTTGGTGCTCGATGAAGCAACAGCATCAATTGATAATGCCACTGATTTGATTCTGCAGAAAACTATAAGGAGTGAATTTGCAGATTGCACTGTGGTCACAGTAGCTCACAGGATACCAACAGTGATGGATTGCACTAAAGTTCTATCCATAAGTGATGGAAAGTTGGTGGAATATGATGAGCCAATGAAGTTGATGAAGAGGGAAGATTCTTTGTTTGGGCAGCTTGTGAAGGAATATTGGTCTCATCTTCAATCTGCAGAATCATTTTGA 4437 0.398 MEDFWRIFCEESSCSESGGKHCSYDFDLLKDPSTCMNHFMIICLNVLLLILLLFTIILKSSSTKTFHGSIQVQIRFSNLQVASAIVSGCLGLVHLGFGIWSLEEKLRKTDTSFPIHWWILEFSQGITWLCVGLTISLKLRELSKPWSKLVSILVFLISGIFCAISIFFVVGGSEVSIKIALDVLSFPGAILLLICSYKGHKYDERSIGESLYAPLNGEDKTSSANYVTPFAEAGFFSKMSFWWLNTLMKMGKEKAIQEEDIPKLREEDQAESCYLVFLDQLNRIKQKEPSSQPSVFWTVIMCHWKDIFVSGFFALLKVLTISAGPLLLNSFILVAEGKESFKYEGYILAITLFFTKILESISQRQWYFRSRLIGLRVRSLLTAAIYKKQLRLSNASRLIHSGGEVMNYATVDAYRIGEFPFWFHQTWTTSIQLCIALVILFNAVGLATLASLVVIVLTVLCNAPLAKVQHKFQTKLMVAQDERLKASSEALVNMKVLKLYAWETHFKNAIERLRKLELKFLTSVQLRRAYNTFLFWSSPVLVSAATFGACYFLKVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLEAPELQSANVRKKSSNGSLNGSIHINSADFSWEDNDSKPTLRNINLEVKPGQKVAICGEVGSGKSTLLAAILGEVPKTHGNIEVHGKFAYVSQTAWIQTGTIRENILFGSALDSQRYQETLERSSLVKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYVMEALREKTVMLVTHQVDFLPAFDSISLMCDGEILEAASYQYLLSSSQDFQNLVHAHKETAGSERLPDVTSSHTHVNPTKEINKSYSEKQLKDTKGDQLIKQEEREIGDTGLKPYLQYLNQNKGYLYFCISALMHLAFVIGQVLQNTWMAANVDNPRVSTLKLIAVYLLIGVVSTFFLLIRTLGIVALGIQSSKSLFSQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFNLMFAVGATTNCYANLVVLAVVTWQVLFVSIPMVYITICLQRYYFASAKELMRLNGTTKSYVANHLAESVAGSMTIRAFEEEDRFFAKNLDLIDVNASPFFHNFTANEWLIQRLEAVSACVLVSAALCMVVLPPGTFSSGFIGMAISYGLSLNASLVFSIQNQCTTANYIISVERLNQYMHIPSEAPEVIEGNRPPANWPMVGKVEINNLQIRYRPDSPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICTIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLLEAVQEKEGGLDSLVVEDGSNWSTGQRQLFCLGRALLWRSRVLVLDEATASIDNATDLILQKTIRSEFADCTVVTVAHRIPTVMDCTKVLSISDGKLVEYDEPMKLMKREDSLFGQLVKEYWSHLQSAESF 1478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2094 1478 FunFam ABC transporter C family member 10 606 859 - -
Lele08g2094 1478 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1232 1466 IPR003439 GO:0005524
Lele08g2094 1478 FunFam ABC transporter C family member 5 881 1213 - -
Lele08g2094 1478 CDD ABCC_MRP_domain2 1230 1450 - -
Lele08g2094 1478 Gene3D - 621 853 IPR027417 -
Lele08g2094 1478 Gene3D - 1216 1467 IPR027417 -
Lele08g2094 1478 Pfam ABC transporter 1249 1397 IPR003439 GO:0005524
Lele08g2094 1478 MobiDBLite consensus disorder prediction 855 874 - -
Lele08g2094 1478 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 308 588 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g2094 1478 CDD ABCC_MRP_domain1 623 823 - -
Lele08g2094 1478 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Lele08g2094 1478 MobiDBLite consensus disorder prediction 851 878 - -
Lele08g2094 1478 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524|GO:0016887
Lele08g2094 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 845 IPR027417 -
Lele08g2094 1478 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 846 IPR003439 GO:0005524
Lele08g2094 1478 CDD ABC_6TM_ABCC_D1 309 596 IPR044746 GO:0140359
Lele08g2094 1478 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 231 1466 - -
Lele08g2094 1478 Pfam ABC transporter transmembrane region 308 573 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g2094 1478 Pfam ABC transporter transmembrane region 920 1157 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g2094 1478 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 926 1195 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g2094 1478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1222 1463 IPR027417 -
Lele08g2094 1478 FunFam ABC transporter C family member 3 1215 1467 - -
Lele08g2094 1478 SUPERFAMILY ABC transporter transmembrane region 296 601 IPR036640 GO:0005524|GO:0016020
Lele08g2094 1478 Gene3D ABC transporter type 1, transmembrane domain 280 605 IPR036640 GO:0005524|GO:0016020
Lele08g2094 1478 Gene3D ABC transporter type 1, transmembrane domain 879 1213 IPR036640 GO:0005524|GO:0016020
Lele08g2094 1478 CDD ABC_6TM_ABCC_D2 918 1207 IPR044726 GO:0140359
Lele08g2094 1478 SMART AAA_5 1258 1450 IPR003593 -
Lele08g2094 1478 SMART AAA_5 650 823 IPR003593 -
Lele08g2094 1478 FunFam ABC transporter C family member 10 291 604 - -
Lele08g2094 1478 SUPERFAMILY ABC transporter transmembrane region 905 1212 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2094 Lele-ChrLele08 19680677 19688150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g2094 619 839 Calmodulin-binding Proteins AT2G36910 30.802 9.77e-25 110